G934566


Basic Information

Item Value
gene id G934566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1810101 ~ 1810786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065577
GTTGTCTCCATATTTATgtattatggccattgaaataCTAGCTATTAAAATTAGATCTAACAAGAACATCAAGGGGTTAGAAATACAGGGGATAAAAACAAAAATGATCGATGTGGGTTGATGTCTCTAGTCCACattctggatccctgcacagtctcattgAACATCTTGATAATTTTTCTAGTCTCTCTGGACTTAAACCTAATTATGACAAGTGTACCACATTACGTATTGGATCGTTAAAAAATACAATGTTTACACTaccttgtagtttaccaataaaatgggtggatggtgaagtagacatacttggtactcacatctcaaaaaatataaattaacTTACCGCAATTCATTTCTTTAGAAAGTTAGCAAAAGTAGATAAGATTCTGCAAACATTGAGAGGTAAATACTTGTATATTCATGGTAAAACCACATTGATTAAAAACTTATTTGGGATCGGTGTCCTTTCCACGGCACACTTGATTAAACgtaggttgtaagtaacaagaatatttcacaggacatagacatatctgctATTGGCAGAAAGTtttaattattgttaatctaactgcactgtccaatttacattaGCTATTGCAGTGAAAGAATGCTgttctattgtttgaggagagtgcaccattttcaacatgaaaagttattaataaacaaattaggcatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065577 True 686 lncRNA 0.33 1 1810101 1810786

Neighbor

gene id symbol gene type direction distance location
nktr nktr coding upstream 330473 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 445829 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 950570 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1163140 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 1205762 575640 ~ 604339 (+)
LOC110535167 LOC106579754 coding downstream 32378 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 565915 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 608553 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1437040 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1591266 3402052 ~ 3402867 (+)
G934546 NA non-coding upstream 27444 1781600 ~ 1782657 (+)
G934532 NA non-coding upstream 38374 1769379 ~ 1771727 (+)
G934498 NA non-coding upstream 82010 1727637 ~ 1728091 (+)
G934480 NA non-coding upstream 98870 1710950 ~ 1711231 (+)
G934478 NA non-coding upstream 101862 1707904 ~ 1708239 (+)
G934567 NA non-coding downstream 220 1811006 ~ 1811312 (+)
G934570 NA non-coding downstream 4421 1815207 ~ 1815422 (+)
G934576 NA non-coding downstream 14067 1824853 ~ 1825114 (+)
G934577 NA non-coding downstream 14522 1825308 ~ 1825509 (+)
G934578 NA non-coding downstream 14779 1825565 ~ 1825822 (+)
G934256 NA other upstream 314087 1488076 ~ 1496014 (+)
G934169 NA other upstream 502342 1307527 ~ 1307759 (+)
G933799 NA other upstream 858517 949531 ~ 951584 (+)
G933679 NA other upstream 1081896 725187 ~ 728205 (+)
G934579 NA other downstream 15841 1826627 ~ 1827366 (+)
G934640 NA other downstream 97874 1908660 ~ 1909080 (+)
G935846 NA other downstream 1739253 3550039 ~ 3550487 (+)
G935976 NA other downstream 2169985 3980771 ~ 3981151 (+)
G935977 NA other downstream 2171065 3981851 ~ 3982198 (+)

Expression


Co-expression Network