G934570


Basic Information

Item Value
gene id G934570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1815207 ~ 1815422 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065581
ATTAGCACTCATAATCGCCTGCATCAGAAGACTTGTAGAACAGCTAAATGCGTTTTTTGCCTTCCTGCGTAACTTTTACACAGTAGATCTCTGCTAAACTTAAATTCACATGGTGTATCCTTCTCTCTGTGACTCCAGATAACTTCAAAACAAAGTTGACcacaaatacaaagttgccaatcTCTTTCCAATTAACACAAACAAGTGATTTATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065581 True 216 lncRNA 0.36 1 1815207 1815422

Neighbor

gene id symbol gene type direction distance location
nktr nktr coding upstream 335579 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 450935 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 955676 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1168246 632123 ~ 646961 (+)
LOC110536523 LOC106563098 coding upstream 1210868 575640 ~ 604339 (+)
LOC110535167 LOC106579754 coding downstream 27742 1839051 ~ 1855581 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 561279 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 603917 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1432404 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1586630 3402052 ~ 3402867 (+)
G934567 NA non-coding upstream 3895 1811006 ~ 1811312 (+)
G934566 NA non-coding upstream 4421 1810101 ~ 1810786 (+)
G934546 NA non-coding upstream 32550 1781600 ~ 1782657 (+)
G934532 NA non-coding upstream 43480 1769379 ~ 1771727 (+)
G934498 NA non-coding upstream 87116 1727637 ~ 1728091 (+)
G934576 NA non-coding downstream 9431 1824853 ~ 1825114 (+)
G934577 NA non-coding downstream 9886 1825308 ~ 1825509 (+)
G934578 NA non-coding downstream 10143 1825565 ~ 1825822 (+)
G934581 NA non-coding downstream 13577 1828999 ~ 1829270 (+)
G934582 NA non-coding downstream 13924 1829346 ~ 1829590 (+)
G934256 NA other upstream 319193 1488076 ~ 1496014 (+)
G934169 NA other upstream 507448 1307527 ~ 1307759 (+)
G933799 NA other upstream 863623 949531 ~ 951584 (+)
G933679 NA other upstream 1087002 725187 ~ 728205 (+)
G934579 NA other downstream 11205 1826627 ~ 1827366 (+)
G934640 NA other downstream 93238 1908660 ~ 1909080 (+)
G935846 NA other downstream 1734617 3550039 ~ 3550487 (+)
G935976 NA other downstream 2165349 3980771 ~ 3981151 (+)
G935977 NA other downstream 2166429 3981851 ~ 3982198 (+)

Expression


Co-expression Network