G934614


Basic Information

Item Value
gene id G934614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1874114 ~ 1874381 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065652
tcagtcttctccttgtatgagcttaTATCTTATATCTTATATCTCCCTCGCTAACTTTAAGAATCAGCTGtctgatcactgcagctgtacacagcccatctgtaaatagcccatccaaccaactccctacctcatccccatatttgtttttgtttttctgctcttttgcacaccagtatttctacttgcacatcctcatctgcacatctatcactccagtgtaaattgctcaaTTATAATTACTTTGCCACGATTGGCCTATTGCCGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065652 True 268 lncRNA 0.41 1 1874114 1874381

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 18545 1839051 ~ 1855581 (+)
nktr nktr coding upstream 394486 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 509842 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1014583 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1227153 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 502320 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 544958 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1373445 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1527671 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1649176 3523557 ~ 3616312 (+)
G934582 NA non-coding upstream 44524 1829346 ~ 1829590 (+)
G934581 NA non-coding upstream 44844 1828999 ~ 1829270 (+)
G934578 NA non-coding upstream 48292 1825565 ~ 1825822 (+)
G934577 NA non-coding upstream 48605 1825308 ~ 1825509 (+)
G934627 NA non-coding downstream 14898 1889279 ~ 1889512 (+)
G934630 NA non-coding downstream 17505 1891886 ~ 1892089 (+)
G934635 NA non-coding downstream 26574 1900955 ~ 1901172 (+)
G934637 NA non-coding downstream 29011 1903392 ~ 1903766 (+)
G934643 NA non-coding downstream 41484 1915865 ~ 1916182 (+)
G934579 NA other upstream 46748 1826627 ~ 1827366 (+)
G934256 NA other upstream 378100 1488076 ~ 1496014 (+)
G934169 NA other upstream 566355 1307527 ~ 1307759 (+)
G933799 NA other upstream 922530 949531 ~ 951584 (+)
G933679 NA other upstream 1145909 725187 ~ 728205 (+)
G934640 NA other downstream 34279 1908660 ~ 1909080 (+)
G935846 NA other downstream 1675658 3550039 ~ 3550487 (+)
G935976 NA other downstream 2106390 3980771 ~ 3981151 (+)
G935977 NA other downstream 2107470 3981851 ~ 3982198 (+)
G937051 NA other downstream 3145524 5019905 ~ 5028145 (+)

Expression


Co-expression Network