G934627


Basic Information

Item Value
gene id G934627
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1889279 ~ 1889512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065665
CAGTAACGCTCCATAATGGTGCAGCGACCTGCTGCTTCTACAAATAGTTAAATCCTTGAACTGCAGCTAAAGTGACGCAGCGCCGGCAGACATCAACAAAATAAACAATATTAGTATTCATTTGAGAAATGAAGGGATTTGAAAAACAAGACAGAACCCAAACCAAAGACCAAAAAACCAACCATGAATACTGCCATTGTCCCTAGGCTTTTCAATTCTGATTCACCATGTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065665 True 234 lncRNA 0.40 1 1889279 1889512

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 33710 1839051 ~ 1855581 (+)
nktr nktr coding upstream 409651 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 525007 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1029748 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1242318 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 487189 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 529827 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1358314 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1512540 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1634045 3523557 ~ 3616312 (+)
G934614 NA non-coding upstream 14898 1874114 ~ 1874381 (+)
G934582 NA non-coding upstream 59689 1829346 ~ 1829590 (+)
G934581 NA non-coding upstream 60009 1828999 ~ 1829270 (+)
G934578 NA non-coding upstream 63457 1825565 ~ 1825822 (+)
G934630 NA non-coding downstream 2374 1891886 ~ 1892089 (+)
G934635 NA non-coding downstream 11443 1900955 ~ 1901172 (+)
G934637 NA non-coding downstream 13880 1903392 ~ 1903766 (+)
G934643 NA non-coding downstream 26353 1915865 ~ 1916182 (+)
G934647 NA non-coding downstream 31271 1920783 ~ 1921021 (+)
G934579 NA other upstream 61913 1826627 ~ 1827366 (+)
G934256 NA other upstream 393265 1488076 ~ 1496014 (+)
G934169 NA other upstream 581520 1307527 ~ 1307759 (+)
G933799 NA other upstream 937695 949531 ~ 951584 (+)
G933679 NA other upstream 1161074 725187 ~ 728205 (+)
G934640 NA other downstream 19148 1908660 ~ 1909080 (+)
G935846 NA other downstream 1660527 3550039 ~ 3550487 (+)
G935976 NA other downstream 2091259 3980771 ~ 3981151 (+)
G935977 NA other downstream 2092339 3981851 ~ 3982198 (+)
G937051 NA other downstream 3130393 5019905 ~ 5028145 (+)

Expression


Co-expression Network