G934643


Basic Information

Item Value
gene id G934643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 1915865 ~ 1916182 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065682
CACACCATTAcaacgtgcacaagcactacaaaATAAACAATTcgggacaaggacatggggggaacagaggattaaacacacaacatgtaatgatggaattgaaaacaggtgtgtgggaagacaagacaaaacaaatggaaaatgaaaggtggatcggcgatggcttaAAGACCGGTGACATTGACCGCCAAACGTCGCTGGAACAAGGAGAGAGACCGACTTCATCGTGACACATTGTGttttccaaatgacatcaccaagaggtaaaatacatagtgaaaacaatagtggtcctaaaatggaaccttgaggaacgcc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065682 True 318 lncRNA 0.43 1 1915865 1916182

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 60296 1839051 ~ 1855581 (+)
nktr nktr coding upstream 436237 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 551593 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1056334 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1268904 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 460519 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 503157 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1331644 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1485870 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1607375 3523557 ~ 3616312 (+)
G934637 NA non-coding upstream 12099 1903392 ~ 1903766 (+)
G934635 NA non-coding upstream 14693 1900955 ~ 1901172 (+)
G934630 NA non-coding upstream 23776 1891886 ~ 1892089 (+)
G934627 NA non-coding upstream 26353 1889279 ~ 1889512 (+)
G934614 NA non-coding upstream 41484 1874114 ~ 1874381 (+)
G934647 NA non-coding downstream 4601 1920783 ~ 1921021 (+)
G934652 NA non-coding downstream 21158 1937340 ~ 1937556 (+)
G934655 NA non-coding downstream 39377 1955559 ~ 1960487 (+)
G934597 NA non-coding downstream 58563 1974745 ~ 1987138 (+)
G934658 NA non-coding downstream 64364 1980546 ~ 1986800 (+)
G934640 NA other upstream 6785 1908660 ~ 1909080 (+)
G934579 NA other upstream 88499 1826627 ~ 1827366 (+)
G934256 NA other upstream 419851 1488076 ~ 1496014 (+)
G934169 NA other upstream 608106 1307527 ~ 1307759 (+)
G933799 NA other upstream 964281 949531 ~ 951584 (+)
G935846 NA other downstream 1633857 3550039 ~ 3550487 (+)
G935976 NA other downstream 2064589 3980771 ~ 3981151 (+)
G935977 NA other downstream 2065669 3981851 ~ 3982198 (+)
G937051 NA other downstream 3103723 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 3227135 5143317 ~ 5144565 (+)

Expression


Co-expression Network