G934811


Basic Information

Item Value
gene id G934811
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2117160 ~ 2122561 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1065904
aatacagctagagacaccagcctggtataatacagGTATActgtccagcctggtataatacagttagagataccagcctagtgtaatacagctaaagagaccagcctggtataaaacagctagagagaccagccttttataatacaactagagagaccagactggtataatacagctagagagaccagcctgaaaTAATTcacctagagagaccagcctggtataatacatctagacctgcCTGTTAAATACATCTAGAAacgcctggtataatacagctagagagatcagcctggtataatacatctagacctgcCTGTTAAATACATCTAGAAACGCCTGGCATAAtgcatctagagagaccagcctggtataatacatctagaccagcctggtataatgcatctagacaagcctggtataatacagctagagagaccagcctggtataatacagctagatagaaaagcctggtataatacatctagacctgcCTGTTAAATACATCTAGAAacgcctggtataatacagctagagagatcagcctggtataatacatctagaccagcctggtatgatGCATCTAgacaagcctggtataatacagctatagagaccagcctggtataatacatccagaacagcctggtataatacagctagaaagaccagcctgatataatacagctagagcgaccagtctggtataatacagcgagaccagcctggtttaaaaaagctagagagaccagcctggtaaaatgcctctagaccagcctggtataatgcagctagagagaaaagcctggtataatacatttcgaccagcctggtataatacagctagagagaccagcctgaaataatacatctagaccagcctggtataatatatctggaccagcctggtataatacagctagagagaccagcctggtataatacagctagagagaccagcctggtataataaagctagagagaccagcttgGTATAAAGCAGCtagatagaccagcctggtataatgcatttcgaccagcctggtataatacagctagagagaccagcctgaaataatacatctagaccagcctgttataatactactacaccagcctggtataatacagctagagagaccagcctggtatagcacagctacagagacc

Function

NR:

description
PREDICTED: RE1-silencing transcription factor A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1065904 True 1171 lncRNA 0.43 2 2117160 2122561

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 261591 1839051 ~ 1855581 (+)
nktr nktr coding upstream 637532 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 752888 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1257629 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1470199 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 254140 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 296778 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1125265 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1279491 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1400996 3523557 ~ 3616312 (+)
G934804 NA non-coding upstream 282 2111742 ~ 2116878 (+)
G934785 NA non-coding upstream 10835 2030833 ~ 2106325 (+)
G934787 NA non-coding upstream 30609 2075437 ~ 2086551 (+)
G934795 NA non-coding upstream 64829 2044230 ~ 2052331 (+)
G934789 NA non-coding upstream 98717 2018137 ~ 2018443 (+)
G934812 NA non-coding downstream 72 2122633 ~ 2159184 (+)
G934883 NA non-coding downstream 55533 2178094 ~ 2184435 (+)
G934890 NA non-coding downstream 67873 2190434 ~ 2190643 (+)
G934898 NA non-coding downstream 74430 2196991 ~ 2197214 (+)
G934899 NA non-coding downstream 74685 2197246 ~ 2197517 (+)
G934640 NA other upstream 208080 1908660 ~ 1909080 (+)
G934579 NA other upstream 289794 1826627 ~ 1827366 (+)
G934256 NA other upstream 621146 1488076 ~ 1496014 (+)
G934169 NA other upstream 809401 1307527 ~ 1307759 (+)
G933799 NA other upstream 1165576 949531 ~ 951584 (+)
G935846 NA other downstream 1427478 3550039 ~ 3550487 (+)
G935976 NA other downstream 1858210 3980771 ~ 3981151 (+)
G935977 NA other downstream 1859290 3981851 ~ 3982198 (+)
G937051 NA other downstream 2897344 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 3020756 5143317 ~ 5144565 (+)

Expression


Co-expression Network