G934890


Basic Information

Item Value
gene id G934890
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2190434 ~ 2190643 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066028
cctaacccattaaatgtaaccctaaccctaacccattaaatgtaaccctaaccccaacccattAAATGTAACCCTAAACCCGTAcatgtaaccctaacccattaaatgtaaccctaacccattaaatgtaaccatagcccattaaatgtaaccctaaccctaacccattaaatgtaaccctaacccattaaatgtaaccctaaccctaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066028 True 210 lncRNA 0.39 1 2190434 2190643

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 334865 1839051 ~ 1855581 (+)
nktr nktr coding upstream 710806 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 826162 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1330903 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1543473 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 186058 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 228696 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1057183 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1211409 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1332914 3523557 ~ 3616312 (+)
G934883 NA non-coding upstream 5999 2178094 ~ 2184435 (+)
G934812 NA non-coding upstream 31250 2122633 ~ 2159184 (+)
G934811 NA non-coding upstream 67873 2117160 ~ 2122561 (+)
G934810 NA non-coding upstream 72825 2115435 ~ 2117609 (+)
G934804 NA non-coding upstream 73556 2111742 ~ 2116878 (+)
G934898 NA non-coding downstream 6348 2196991 ~ 2197214 (+)
G934899 NA non-coding downstream 6603 2197246 ~ 2197517 (+)
G934910 NA non-coding downstream 25107 2215750 ~ 2216183 (+)
G934950 NA non-coding downstream 57107 2247750 ~ 2248050 (+)
G934961 NA non-coding downstream 68659 2259302 ~ 2259740 (+)
G934640 NA other upstream 281354 1908660 ~ 1909080 (+)
G934579 NA other upstream 363068 1826627 ~ 1827366 (+)
G934256 NA other upstream 694420 1488076 ~ 1496014 (+)
G934169 NA other upstream 882675 1307527 ~ 1307759 (+)
G933799 NA other upstream 1238850 949531 ~ 951584 (+)
G935846 NA other downstream 1359396 3550039 ~ 3550487 (+)
G935976 NA other downstream 1790128 3980771 ~ 3981151 (+)
G935977 NA other downstream 1791208 3981851 ~ 3982198 (+)
G937051 NA other downstream 2829262 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2952674 5143317 ~ 5144565 (+)

Expression


Co-expression Network