G934898


Basic Information

Item Value
gene id G934898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2196991 ~ 2197214 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066036
agcgagaccattGAAACATTGTCGCTCTGTGGTGTTCTGTTTGTGTGGGCTCTCCTGTCACATAGACCTGTGATATCATCTTTCCAAAGCCCCACACAATGTCACGTGACCGACTCCTCGCTGACTGCTCTGCGCCCCCAGACTGATGATGCAGACAGACTGTAAAGACACGTAAGGCTCTGAATACTGCCTGATCGCGGTTGTTAGCCTTAAAACCCCCCCGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066036 True 224 lncRNA 0.52 1 2196991 2197214

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 341422 1839051 ~ 1855581 (+)
nktr nktr coding upstream 717363 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 832719 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1337460 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1550030 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 179487 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 222125 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 1050612 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1204838 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1326343 3523557 ~ 3616312 (+)
G934890 NA non-coding upstream 6348 2190434 ~ 2190643 (+)
G934883 NA non-coding upstream 12556 2178094 ~ 2184435 (+)
G934812 NA non-coding upstream 37807 2122633 ~ 2159184 (+)
G934811 NA non-coding upstream 74430 2117160 ~ 2122561 (+)
G934810 NA non-coding upstream 79382 2115435 ~ 2117609 (+)
G934899 NA non-coding downstream 32 2197246 ~ 2197517 (+)
G934910 NA non-coding downstream 18536 2215750 ~ 2216183 (+)
G934950 NA non-coding downstream 50536 2247750 ~ 2248050 (+)
G934961 NA non-coding downstream 62088 2259302 ~ 2259740 (+)
G934970 NA non-coding downstream 73633 2270847 ~ 2271374 (+)
G934640 NA other upstream 287911 1908660 ~ 1909080 (+)
G934579 NA other upstream 369625 1826627 ~ 1827366 (+)
G934256 NA other upstream 700977 1488076 ~ 1496014 (+)
G934169 NA other upstream 889232 1307527 ~ 1307759 (+)
G933799 NA other upstream 1245407 949531 ~ 951584 (+)
G935846 NA other downstream 1352825 3550039 ~ 3550487 (+)
G935976 NA other downstream 1783557 3980771 ~ 3981151 (+)
G935977 NA other downstream 1784637 3981851 ~ 3982198 (+)
G937051 NA other downstream 2822691 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2946103 5143317 ~ 5144565 (+)

Expression


Co-expression Network