G934950


Basic Information

Item Value
gene id G934950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2247750 ~ 2248050 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066097
gcTCTACACAAACAGGGGATAGACTAGTATCCTGTCCAGAGAGGTACTGTATATCAAGCTGCCTCACTCTACACAAACAGgggatagactagtgtcctgtccagagaGGTACTGAACTTCAAGCTGCCTCGCTCTACACAAACAGgggatagactagtgtcctgtccagagaggtactgtacatcaagctgcctcgcTCTACACAAACAGGAGATAAACTACTAGCCTATGAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066097 True 236 lncRNA 0.48 2 2247750 2248050

Neighbor

gene id symbol gene type direction distance location
LOC110535167 LOC106579754 coding upstream 392181 1839051 ~ 1855581 (+)
nktr nktr coding upstream 768122 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 883478 1352989 ~ 1364272 (+)
LOC110535150 LOC106590688 coding upstream 1388219 742492 ~ 859531 (+)
LOC110535151 LOC106579763 coding upstream 1600789 632123 ~ 646961 (+)
si:ch73-206p6.1 LOC106579752 coding downstream 128651 2376701 ~ 2387592 (+)
plod2 LOC106579751 coding downstream 171289 2419339 ~ 2530974 (+)
LOC118937290 NA coding downstream 999776 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 1154002 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 1275507 3523557 ~ 3616312 (+)
G934910 NA non-coding upstream 31567 2215750 ~ 2216183 (+)
G934899 NA non-coding upstream 50233 2197246 ~ 2197517 (+)
G934898 NA non-coding upstream 50536 2196991 ~ 2197214 (+)
G934890 NA non-coding upstream 57107 2190434 ~ 2190643 (+)
G934883 NA non-coding upstream 63315 2178094 ~ 2184435 (+)
G934961 NA non-coding downstream 11252 2259302 ~ 2259740 (+)
G934970 NA non-coding downstream 22797 2270847 ~ 2271374 (+)
G934981 NA non-coding downstream 36409 2284459 ~ 2284718 (+)
G935007 NA non-coding downstream 70586 2318636 ~ 2318885 (+)
G935015 NA non-coding downstream 75972 2324022 ~ 2324241 (+)
G934640 NA other upstream 338670 1908660 ~ 1909080 (+)
G934579 NA other upstream 420384 1826627 ~ 1827366 (+)
G934256 NA other upstream 751736 1488076 ~ 1496014 (+)
G934169 NA other upstream 939991 1307527 ~ 1307759 (+)
G933799 NA other upstream 1296166 949531 ~ 951584 (+)
G935846 NA other downstream 1301989 3550039 ~ 3550487 (+)
G935976 NA other downstream 1732721 3980771 ~ 3981151 (+)
G935977 NA other downstream 1733801 3981851 ~ 3982198 (+)
G937051 NA other downstream 2771855 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2895267 5143317 ~ 5144565 (+)

Expression


Co-expression Network