XLOC_028516


Basic Information

Item Value
gene id XLOC_028516
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8213170 ~ 8214435 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00058062
CAATTACAACGACATGGCAAAatccagacagtgcaaatacaacgacaatgtaaaattgacagtgatatgtacaatgaataggtgtccacatagttgaggataataataaatataataataacaataacaacaataacaacaataataataataataataataataaagtcccTTCAAATAAAGTGTCTAAATTTAAAATTGTTTAGGTATTAGTACTGAAAAGCAAAACTAGTGTAATAAATTCTGTGTATTAATTACCCCCAAAAAATTAAGGGAGGGGCTTTATTGGATTCTACACACCGGAGCCAATCAACATTAGCTACAAACGAGACTGACCCTCGACTAAACTACTTCCATAACAACATCCTCTGCTTTCAAACAAAGCTGTTGTGTGTTTAAGGTTTGTTTTGCGCAACAATAAACACTAGCTTTGGAGTTTAGCTAAACATTTTCCCGGCGAGGAGATACTTTGTAACTATTCTACGCGTCCGCGATATTTTGTAACCGATACATATTTTCCTGCTGACGTCACAGAGAGTGAGGAGAGACTTCGTAACAATTACTATTCAATCCCGTAGCCGTCTCGCGGACAATTTAAACCTGCTTCACACAGGGACAAGCTAATAAATCAGGAATGAAAGTGCGAAATGCACATGTAGTCACAGGGCTTCCTCTTGACACCGCCTGGGCTGGAGCTTAGGACGGATTCTCAACGGCTTTTACCACACAATAGAGTCCAGGTTGTCCGTGTATGTCGACTCATAAACCTTGCGATGGAAAGAGACTCTCTGCCTGCTCCCTAACACggaatgtgtgtgtatttctccTTCTTTtccctcctccttttcctccattGCCTGCTGGCGCAACAGCGTTTCATTTGAAGAGTCACTCGTGCGCATATTGAGAAATCTCGGGTTTATTTACCTTCCCTTTAGTTTGTCCGGACACATACGGACGAATATAGCCTGTCATTATGCAATATACCGATATATCTCCATATAATCCCACACTATCAATGGGCTGTGTCCGAGCAGACTCTTCAGCTGTGGAAAAATCACTTTGAAAAGCTCCTTACCTTCTTCTACAAGAGATCTAAGAGCCAGGGCGCTTCAAGTGACGTAACGAACCGG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00058062 True 1133 lncRNA 0.40 2 8213170 8214435

Neighbor

gene id symbol gene type direction distance location
XLOC_028514 wnk1b coding downstream 57599 8045564 ~ 8155571 (-)
XLOC_028515 CU695020.1 coding downstream 71704 8141349 ~ 8141466 (-)
XLOC_028513 si:ch211-240l19.5 coding downstream 169206 8042805 ~ 8043964 (-)
XLOC_028512 si:ch211-240l19.6 coding downstream 172734 8039791 ~ 8040436 (-)
XLOC_028511 si:ch211-240l19.7 coding downstream 177650 8034381 ~ 8035520 (-)
XLOC_028517 NA coding upstream 5026 8219461 ~ 8219991 (-)
XLOC_028518 BX649324.1 coding upstream 373352 8587787 ~ 8587908 (-)
XLOC_028519 fbxl14b coding upstream 395082 8609517 ~ 8611841 (-)
XLOC_028520 BX649324.2 coding upstream 420269 8634704 ~ 8638629 (-)
XLOC_028521 BX842699.1 coding upstream 494647 8709082 ~ 8735591 (-)
XLOC_028508 NA non-coding downstream 239835 7971682 ~ 7973335 (-)
XLOC_028504 BX649411.3 non-coding downstream 533075 7679979 ~ 7680095 (-)
XLOC_028501 NA non-coding downstream 559981 7598210 ~ 7653189 (-)
XLOC_028502 NA non-coding downstream 564941 7645101 ~ 7648229 (-)
XLOC_028525 NA non-coding upstream 689856 8904291 ~ 8905453 (-)

Expression


Co-expression Network