XLOC_028517



Basic Information


Item Value
gene id XLOC_028517
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8219461 ~ 8219991 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00057326
CGGCCTCGAATCCCacagaaggagctctggactataaaaggaggaacgatggcaaaggaagccgagagaggaccgggcccgggcatattgttttacttttgctttcagttagaccgtttgttttggtttagacggcacattattacaatattaaaaacTCTTGCAGAAAGCATTATTAACTGTCTGAATCCTCCTCTGGGACTCTGCATCAGCTAATCAATGCTCATCTCCAGTCCTGACCTGCTAGCATGAACTGCTATGTGCTTTTCTTCTGGCCTGACAGGTTCTTGTACATCGGTCTGTCTGAGGGAGTTAATTAGGTCAGAGATGGACCATGCTAAACCACAGAGAGTCCTGCTGGTTTTCTCTATCTGGACAGCTCGGGTCTGGTCACTGTGAGCCGCTTTTGCATTTGTGGGCAAGTGTGAATGTGAAAGACGTCATCAAAGTGTACTACTAGGGTTAGCGGAGGACATACAAGTGAGGTGATGTCAGGCATGAAAATTGTGCTGATGGTTTAATTAGCGTGCT

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00057326 True 531 lncRNA 0.46 1 8219461 8219991

Neighbor


gene id symbol gene type direction distance location
XLOC_028516 NA coding downstream 5026 8213170 ~ 8214435 (-)
XLOC_028514 wnk1b coding downstream 63890 8045564 ~ 8155571 (-)
XLOC_028515 CU695020.1 coding downstream 77995 8141349 ~ 8141466 (-)
XLOC_028513 si:ch211-240l19.5 coding downstream 175497 8042805 ~ 8043964 (-)
XLOC_028512 si:ch211-240l19.6 coding downstream 179025 8039791 ~ 8040436 (-)
XLOC_028518 BX649324.1 coding upstream 367796 8587787 ~ 8587908 (-)
XLOC_028519 fbxl14b coding upstream 389526 8609517 ~ 8611841 (-)
XLOC_028520 BX649324.2 coding upstream 414713 8634704 ~ 8638629 (-)
XLOC_028521 BX842699.1 coding upstream 489091 8709082 ~ 8735591 (-)
XLOC_028522 ttll12 coding upstream 519102 8739093 ~ 8779189 (-)
XLOC_028508 NA non-coding downstream 246126 7971682 ~ 7973335 (-)
XLOC_028504 BX649411.3 non-coding downstream 539366 7679979 ~ 7680095 (-)
XLOC_028501 NA non-coding downstream 566272 7598210 ~ 7653189 (-)
XLOC_028525 NA non-coding upstream 684300 8904291 ~ 8905453 (-)
XLOC_028527 NA non-coding upstream 828315 9048306 ~ 9050945 (-)

Expression



Co-expression Network