G935246


Basic Information

Item Value
gene id G935246
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2664341 ~ 2664900 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066440
GTGGAAGAAGCCACAAATCCTCTGCATCCCACTTCAACTGGCCAGACTTTTGCATTCCAGCCACGCTGAGTTGCGTCTGCTGCCAACTCTGTGTAACGCAGTTTCTTACGCTCGTAGGCCTCTTCAACAGAGTTTTCCCACGGGACTGTGAGCTCTATGATGTACACAACCtttcgtgaaggggaccagagtacCATGTCTGGCCTAAGGTTGGTAGAAGCAATCTCAGGTGGAAAAATTAGTTGCTGGCCAATATCGACAAGCATCTTCCAGTCCCGGGCCATGGCTAGGTGTCCAGTTTCTGGCTTCGTAGGAGGATGCTTgggccttttctgtccctcccggatgaatgttgttgttttgacgggattgcttgtttttggacgtaatgaattggttgcactcctcttggtctcaagtgctgcagccaggctcttgaggacctgattgtgcctccaggtgtagcggccttgtgagaggctggtcttgcaacctgtcattatatgcctgagagttgctggagctgggcagagggggcaggtcgagtcctcgccatacca

Function

NR:

description
PREDICTED: uncharacterized protein LOC105912973

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066440 True 560 lncRNA 0.52 1 2664341 2664900

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 133367 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 276749 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 808772 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1184713 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1300069 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 582926 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 737152 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 858657 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 969040 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 987895 3652795 ~ 3676466 (+)
G935244 NA non-coding upstream 313 2663655 ~ 2664028 (+)
G935231 NA non-coding upstream 10954 2653182 ~ 2653387 (+)
G935221 NA non-coding upstream 18090 2646023 ~ 2646251 (+)
G935219 NA non-coding upstream 18517 2645583 ~ 2645824 (+)
G935196 NA non-coding upstream 91265 2572733 ~ 2573076 (+)
G935248 NA non-coding downstream 310 2665210 ~ 2665454 (+)
G935252 NA non-coding downstream 15089 2679989 ~ 2680283 (+)
G935265 NA non-coding downstream 35318 2700218 ~ 2700457 (+)
G935267 yo84 non-coding downstream 35800 2700700 ~ 2700931 (+)
G935284 LOC106578716 non-coding downstream 49066 2713966 ~ 2714210 (+)
G934640 NA other upstream 755261 1908660 ~ 1909080 (+)
G934579 NA other upstream 836975 1826627 ~ 1827366 (+)
G934256 NA other upstream 1168327 1488076 ~ 1496014 (+)
G934169 NA other upstream 1356582 1307527 ~ 1307759 (+)
G933799 NA other upstream 1712757 949531 ~ 951584 (+)
G935846 NA other downstream 885139 3550039 ~ 3550487 (+)
G935976 NA other downstream 1315871 3980771 ~ 3981151 (+)
G935977 NA other downstream 1316951 3981851 ~ 3982198 (+)
G937051 NA other downstream 2355005 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2478417 5143317 ~ 5144565 (+)

Expression


Co-expression Network