XLOC_028519 (fbxl14b)


Basic Information

Item Value
gene id XLOC_028519
gene name fbxl14b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8609517 ~ 8611841 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055329
TGCGAGCGGAGCACAAACGCGAAACGAAACCTCACTCTTTTATCTGATAGCGGACTGAATTTATTTTCTCCCGAGGTTTGTGGCAGTTTTAGACATCTTTTGAAAATGTACGACCGTCTGGATCCCCGGGTCGAGCGAAGACTATTATCAAAGCGCCAAACGGGCAGCAGCGCTGCCTGACCGCCCGCTCGCTGTCGGTCTGAATCGGATCAAGCGTCTTTTGGGggcatttttttgcatttgaatCTTTCCTGCGCCACTGAAAGGATCACCCGGGACGGAGAGTTGCCGATTTGCACACTTAAATGTAAAGAGAAAAGCTTGGGGAGCTTTCTGAAAGCCCTTTTTTTCCTCCGGAGGGGACTACGAGCCGCGACGGTGACCGTTGGTGGGGGTTTGCCGCCGTTTGTTTTCTTGAGCGCGTGTGGAAGATGGAGACGCACATCTCGTGTCTCTTCCCGGAGATTTTAGCCATGATTTTCAGCTACTTGGACGTGAGGGACAAAGGCAGGGTGGCCCAAGTGTGCACAGCGTGGAGGGACGCGTCCTACCACAAGTCCGTGTGGAGGGGGGTGGAAGCCAAGCTGCATCTGAGACGGGCGAACCCGTCTCTGTTCCCCAGCCTCCAGGCGCGAGGCATCCGGCGCGTGCAGATCCTCAGCCTGCGGCGCAGCCTCAGCTACGTGATCCAGGGGATGCCCAACATCGAGAGCTTGAATCTGAGCGGCTGCTACAACTTAACGGATAACGGCCTGGGGCACGCGTTCGTGCAAGAGATCCCTTCCCTGAGGGTGCTCAATCTGAGCCTTTGCAAGCAGATCACGGATTCGAGTTTGGGCAGAATAGCGCAGTATCTCAAAAACTTGGAGGTGCTTGAACTGGGTGGCTGCAGTAACATCACGAACACGGGCTTGTTGCTCATCGCGTGGGGTTTGCACAGACTCAAAAGTCTTAATCTGCGGAGCTGCCGGCATGTGTCGGACGTGGGCATCGGGCACCTAGCCGGCATGACCCGGAGCGCGGCGGAGGGCTGCCTCAGCCTGGAATACCTGACCTTGCAGGACTGCCAGAAGTTGACGGACTTGTCCCTTAAGCACATTTCAAAAGGCCTGACCAAGCTGAAAGTGCTCAACCTGAGTTTCTGCGGTGGCATCTCGGACGCTGGCATGATCCACCTCTCTCACATGACGAGCCTGTGGAGCCTTAATCTGCGTTCGTGCGACAACATCAGCGACACGGGCATCATGCACCTCGCCATGGGCACGCTGAGACTCTCCGGACTCGACGTGTCGTTTTGCGATAAGATAGGCGACCAGAGCCTGGCTTATATCGCGCAGGGCCTGTACCAGCTCAAGTCGCTGTCGCTGTGCTCGTGCCACATCAGCGACGATGGCATCAACAGGATGGTGCGCCAAATGCACGAGCTGAGGACGCTGAACATCGGCCAGTGCGTGCGGATTACAGACAAAGGACTGGAGCTGATCGCAGACCACTTGACGCAACTGACCGGCATCGATCTGTATGGATGTACGAAAATCACTAAGAGGGGACTGGAGAGGATCACGCAGCTCCCCTGCCTTAAAGTTTTGAACCTGGGCCTTTGGCAGATGACTGAAAGTGAGAAAGTGAGGTGAAACTTGGGGGGTTTCTGGAGGGAGGGACGGAGGAGAAGGAGGGCGGGAGGGGGATGGGTGGATTTCAATAGAGCAAAGTACATAAAAAGAGGCGTAAAATGCTGAATGTGATACATGTGTCAGTTATTgctattaacacacacacacacacacacacacaaagttgttTTTGTTAACAAAACGCAATATTAAACCTCCCCCTCCCCGACTATCGCGATATTTTGGCTACCTCGTTAGATGTATTATAATGTTATTCTTAAAAAGAATGAGAATTTGTGCCTAGAAAAACAATCCCCTCCCCCTTTATCTCGTCTTTGGCTTAAGGAAAGCAAAAAGACTGAAAGAAAGGATGGGTTCAGACTACCTTTTTATTTCCCTTCCTTCATATAGCCAACAGAAGGACTTTCAAACAAGTCTATGGGTAGTTGACATCACATTTCAAGCAGATGTGACAGTTGTTCACCTTAAGACGTTTTAGTTCTTCATTATTAAACATGCCATTTCTTTGTGATCCTAAATTAGCCGAGAGACTACATGCAATACTTGCAttaaaatgcatcacatgaccattaaaagtgaagtagatttaaaaaaaaaaaagaggactaAAATCTCGAATGAAGAAAATTCCATGAACATTTGTCAACTACCCTTATGCAAATACTGGGTTTGTACACTAAAGCTTTTATAT

Function

symbol description
fbxl14b Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Part of SCF ubiquitin ligase complex. Is expressed in hindbrain and midbrain. Orthologous to human FBXL14 (F-box and leucine rich repeat protein 14).

GO:

id name namespace
GO:0016567 protein ubiquitination biological_process
GO:0006511 ubiquitin-dependent protein catabolic process biological_process
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process biological_process
GO:0019005 SCF ubiquitin ligase complex cellular_component
GO:0004842 ubiquitin-protein transferase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3556 Predicted to enable ubiquitin-protein transferase activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to act upstream of or within protein ubiquitination. Part of SCF ubiquitin ligase complex. Is expressed in hindbrain and midbrain. Orthologous to human FBXL14 (F-box and leucine rich repeat protein 14).

Ensembl:

ensembl_id ENSDARG00000045801

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055329 True 2325 mRNA 0.50 1 8609517 8611841

Neighbor

gene id symbol gene type direction distance location
XLOC_028518 BX649324.1 coding downstream 21609 8587787 ~ 8587908 (-)
XLOC_028517 NA coding downstream 389526 8219461 ~ 8219991 (-)
XLOC_028516 NA coding downstream 395082 8213170 ~ 8214435 (-)
XLOC_028514 wnk1b coding downstream 453946 8045564 ~ 8155571 (-)
XLOC_028515 CU695020.1 coding downstream 468051 8141349 ~ 8141466 (-)
XLOC_028520 BX649324.2 coding upstream 22863 8634704 ~ 8638629 (-)
XLOC_028521 BX842699.1 coding upstream 97241 8709082 ~ 8735591 (-)
XLOC_028522 ttll12 coding upstream 127252 8739093 ~ 8779189 (-)
XLOC_028523 pnpla3 coding upstream 168338 8780179 ~ 8795250 (-)
XLOC_028524 mpped1 coding upstream 237975 8849816 ~ 8903240 (-)
XLOC_028508 NA non-coding downstream 636182 7971682 ~ 7973335 (-)
XLOC_028525 NA non-coding upstream 292450 8904291 ~ 8905453 (-)
XLOC_028527 NA non-coding upstream 436465 9048306 ~ 9050945 (-)
XLOC_028533 NA non-coding upstream 776977 9388818 ~ 9389648 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_00597946_00601637 FBXL13, FBXL14B, FBXL14, FBXL14.S, FBXL14A coding CI01000066 null 597710 ~ 601637 (-)
bowfin (Amia calva) AMCG00006905 fbxl14b,LOC106590767,LOC107580311,LOC107656333 coding CM030134.1 CM030134.1 25336345 ~ 25340058 (+)