G935284 (LOC106578716)


Basic Information

Item Value
gene id G935284
gene name LOC106578716
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2713966 ~ 2714210 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066498
GGTATGTCCCGCTTATGTACGGACTATCGTAGCGTAAATGCAGTTACAAAGTCTGATTCTTTTCCTCTACCTCGCTTAGATGACTGCATTGATAGAATTGGCTCTGCTGCTTACATTAGTAAGTTAGATTTGCTTAAAGGTTATTGGCAGGTGCCTCTGACCTCTCGAGCTTCTGACATATCGGCTTTTGTTACGCCAGATAACTTCGTACAATATACTGTGATGCCCTTTGGCATGTGTAATGC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106578716

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066498 True 245 lncRNA 0.43 1 2713966 2714210

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 182992 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 326374 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 858397 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1234338 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1349694 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 533616 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 687842 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 809347 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 919730 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 938585 3652795 ~ 3676466 (+)
G935267 yo84 non-coding upstream 13035 2700700 ~ 2700931 (+)
G935265 NA non-coding upstream 13509 2700218 ~ 2700457 (+)
G935252 NA non-coding upstream 33683 2679989 ~ 2680283 (+)
G935248 NA non-coding upstream 48512 2665210 ~ 2665454 (+)
G935246 NA non-coding upstream 49066 2664341 ~ 2664900 (+)
G935300 NA non-coding downstream 16392 2730602 ~ 2762438 (+)
G935356 NA non-coding downstream 68974 2783184 ~ 2783542 (+)
G935379 NA non-coding downstream 83366 2797576 ~ 2797932 (+)
G935400 NA non-coding downstream 111865 2826075 ~ 2826967 (+)
G935413 NA non-coding downstream 144622 2858832 ~ 2859363 (+)
G934640 NA other upstream 804886 1908660 ~ 1909080 (+)
G934579 NA other upstream 886600 1826627 ~ 1827366 (+)
G934256 NA other upstream 1217952 1488076 ~ 1496014 (+)
G934169 NA other upstream 1406207 1307527 ~ 1307759 (+)
G933799 NA other upstream 1762382 949531 ~ 951584 (+)
G935846 NA other downstream 835829 3550039 ~ 3550487 (+)
G935976 NA other downstream 1266561 3980771 ~ 3981151 (+)
G935977 NA other downstream 1267641 3981851 ~ 3982198 (+)
G937051 NA other downstream 2305695 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2429107 5143317 ~ 5144565 (+)

Expression


Co-expression Network