G935400


Basic Information

Item Value
gene id G935400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2826075 ~ 2826967 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066623
acatggttagcagatgttattggtcacatacacatggttagcagatgttactggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttactggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagatgttactggtcacatacacatggttagcagttgttattggtcacatacacatggttagtagatgttaatggtcacatacacatggttagtagatgttactggtcacatacacatggttagcagatgttaatggtcacatacacatagttagcagatgttattggtcacataaacatggttagcagatgttactggtcacatacacatggttagcagatgttactggtcacatacacatggttagcagatgctaatgtgagtgtagcgaaatgcttgtgcttctagttccgaccatacagtaatatctaacaagtcatctaaaaatttcacaacaactacctcatgcacacaaaaatacacaagtgtaaaggactgaataagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066623 True 614 lncRNA 0.38 2 2826075 2826967

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 295101 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 438483 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 970506 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1346447 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1461803 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 420859 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 575085 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 696590 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 806973 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 825828 3652795 ~ 3676466 (+)
G935379 NA non-coding upstream 28143 2797576 ~ 2797932 (+)
G935356 NA non-coding upstream 42533 2783184 ~ 2783542 (+)
G935300 NA non-coding upstream 63637 2730602 ~ 2762438 (+)
G935284 LOC106578716 non-coding upstream 111865 2713966 ~ 2714210 (+)
G935267 yo84 non-coding upstream 125144 2700700 ~ 2700931 (+)
G935413 NA non-coding downstream 31865 2858832 ~ 2859363 (+)
G935445 NA non-coding downstream 40548 2867515 ~ 2868595 (+)
G935447 NA non-coding downstream 43124 2870091 ~ 2870323 (+)
G935452 NA non-coding downstream 46924 2873891 ~ 2874369 (+)
G935458 NA non-coding downstream 50774 2877741 ~ 2877944 (+)
G934640 NA other upstream 916995 1908660 ~ 1909080 (+)
G934579 NA other upstream 998709 1826627 ~ 1827366 (+)
G934256 NA other upstream 1330061 1488076 ~ 1496014 (+)
G934169 NA other upstream 1518316 1307527 ~ 1307759 (+)
G933799 NA other upstream 1874491 949531 ~ 951584 (+)
G935846 NA other downstream 723072 3550039 ~ 3550487 (+)
G935976 NA other downstream 1153804 3980771 ~ 3981151 (+)
G935977 NA other downstream 1154884 3981851 ~ 3982198 (+)
G937051 NA other downstream 2192938 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2316350 5143317 ~ 5144565 (+)

Expression


Co-expression Network