G935452


Basic Information

Item Value
gene id G935452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2873891 ~ 2874369 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066684
atgaccagcatggtcgaataataataaggcagaacagttgaaactggagcagcagcacagccaggtggactggggacagcaaggagtcatcatgtcaggtagtcctggggcatggtcctagggctcaggtcctccgagagagagaaagagagaaggagagaattagagaacgcacacttagattcacacaggacaccaaataggacaggagaagtactccagatataacaaactgaccctagccccccgacacatgaactactgcagcataaatactggaggctgagacaggaggggtcaggagacactgtggcccactccgaggacacccccggacagggccaaacaggaaggatataaccccacccactttgccaaagcacagcccccacaccactagagggatatcttcaaccaccaacttaccatcctgagacaaggctgagtatagcccacaaagacctccgccacggcacaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066684 True 479 lncRNA 0.53 1 2873891 2874369

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 342917 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 486299 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1018322 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1394263 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1509619 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 373457 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 527683 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 649188 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 759571 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 778426 3652795 ~ 3676466 (+)
G935447 NA non-coding upstream 3568 2870091 ~ 2870323 (+)
G935445 NA non-coding upstream 5296 2867515 ~ 2868595 (+)
G935413 NA non-coding upstream 14528 2858832 ~ 2859363 (+)
G935400 NA non-coding upstream 46924 2826075 ~ 2826967 (+)
G935379 NA non-coding upstream 75959 2797576 ~ 2797932 (+)
G935458 NA non-coding downstream 3372 2877741 ~ 2877944 (+)
G935500 NA non-coding downstream 43541 2917910 ~ 2918709 (+)
G935509 NA non-coding downstream 50925 2925294 ~ 2925527 (+)
G935523 NA non-coding downstream 74034 2948403 ~ 2948615 (+)
G935529 NA non-coding downstream 83860 2958229 ~ 2958557 (+)
G934640 NA other upstream 964811 1908660 ~ 1909080 (+)
G934579 NA other upstream 1046525 1826627 ~ 1827366 (+)
G934256 NA other upstream 1377877 1488076 ~ 1496014 (+)
G934169 NA other upstream 1566132 1307527 ~ 1307759 (+)
G933799 NA other upstream 1922307 949531 ~ 951584 (+)
G935846 NA other downstream 675670 3550039 ~ 3550487 (+)
G935976 NA other downstream 1106402 3980771 ~ 3981151 (+)
G935977 NA other downstream 1107482 3981851 ~ 3982198 (+)
G937051 NA other downstream 2145536 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2268948 5143317 ~ 5144565 (+)

Expression


Co-expression Network