XLOC_028521 (BX842699.1)



Basic Information


Item Value
gene id XLOC_028521
gene name BX842699.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8709082 ~ 8735591 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00055331
acaaacaaactgaaCAGACACGCCGCGCTGTAAAGTGCAGGAATACAGTGACAAGAGACGCACCTTGTCCCGTTAACCAGATGCTGAAACACAGAGATCATTTGAAGACAATAACCTCAACATCAACAGCACTTTAACATAAACATGAAAGGGATTCGAACCCCGGTCTCCAAGATGAAAGTATCCTAaaagcagaaaagatctccaaactCGCCTTTTCATGATTGAGTGTCCCGTTAACCAGACGCTGAAACACAGAGATCATTTGAAGACAATAACCTCAACATCAACAGCACCAGTTTAACATAAACATTAAAGGGATTCGAACCCTGGTCTCCAAGATGAAAG

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000093557

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00055331 True 348 lncRNA 0.42 6 8709082 8735591

Neighbor


gene id symbol gene type direction distance location
XLOC_028520 BX649324.2 coding downstream 70453 8634704 ~ 8638629 (-)
XLOC_028519 fbxl14b coding downstream 97241 8609517 ~ 8611841 (-)
XLOC_028518 BX649324.1 coding downstream 121174 8587787 ~ 8587908 (-)
XLOC_028517 NA coding downstream 489091 8219461 ~ 8219991 (-)
XLOC_028516 NA coding downstream 494647 8213170 ~ 8214435 (-)
XLOC_028522 ttll12 coding upstream 3502 8739093 ~ 8779189 (-)
XLOC_028523 pnpla3 coding upstream 44588 8780179 ~ 8795250 (-)
XLOC_028524 mpped1 coding upstream 114225 8849816 ~ 8903240 (-)
XLOC_028525 NA coding upstream 168700 8904291 ~ 8905453 (-)
XLOC_028526 scube1 coding upstream 171302 8906893 ~ 9008851 (-)
XLOC_028515 CU695020.1 non-coding downstream 567616 8141349 ~ 8141466 (-)
XLOC_028527 NA non-coding upstream 312715 9048306 ~ 9050945 (-)
XLOC_028533 NA non-coding upstream 653227 9388818 ~ 9389648 (-)
XLOC_028534 NA non-coding upstream 778957 9514548 ~ 9521942 (-)
XLOC_028540 BX901962.1 non-coding upstream 913692 9649283 ~ 9651968 (-)

Expression



Co-expression Network