XLOC_028522 (ttll12)


Basic Information

Item Value
gene id XLOC_028522
gene name ttll12
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 8739093 ~ 8779189 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055332
ATGCAGAACGGCAGTGTAAACACAGAGGAGGATAAAGAGTATCAGCTCTTCCTCTCTCTGCACAGTCCCGCTTTAAAGGCTGCACGAATCCCTCCGCTTTACTGGAAGAGTTTGCATTTAAAACTTGCCAATGAGGTTTTTGATGCCGGTGATGTGTTTGGCATCATGCAAGTGGAGGAAGATGAAGATGGGGATGAGGAGAAAGAAAAGAGACTCAATCCTGGAGATGAGATCGCTTATAAAGTGATTGTGACCAGAGAGAGTGGTCTGCAGGCTGCGGATCCCACCAGTGTGTTTCTGGTCGATCATGCCTGGACATATAGGGTGGAAAGCGCACGTCAGCAGCTTCTGGAGATTCCTGGCCTGCTGATCAGAATGGCCAGTCTAATGTGTTTGCCTTTCCACGGAGAGGCTCCAGATCCAGATATTGTGGATCTGATACTGGACAGCATGTGGAAATACAACCAAACCTATCAGCTATCCCAGGGATCTGCAGAAGAAAAGGTGCCTGTTTGGTACATCATGGATGAATTTGGATCTCGGGTTCAGCACTCTTCACAGCCGACTTGCTGTATGGCTCCTCTGTTTTACGCTCCGCAACAGATTGCTTATTCTGTGCTGTGGCCACTGCAGAACCTGGAATATGGAGATGAGGTGACACGTGATTTTGCGTATGGAGAGACAGACCCTTTAGTCAGGAGATGCCGTCTGCTACCGTGGCTGCCTGAAGAACTGGATGCTGTGAGCGATGACGTGCAGGAACCGTCTGACCTTTACTATGAAACTATTCTACAGGAGAACAAAGAAAAGCTTCCTGTAGACATCCAGCCTTATTGTGTACCAGATGGAAAAGTGCTGAAGGTTTACACTGAGATGAAGCAGGTTTTCGATCATCTGAAACATCCACGCTTCCAGTTCACTGAAAATGAGGAAGAGGCTGACATAATCTGGGCTTTCTCCCATATCCGAGAATATCGGAAACTAAGTGAGGAACGGCCTCATGTTCTGCTCAACCAGTTCCCATGTGAGACGGTTCTTACTACTAAAGACTGCTTGGCGTCTGTGGCGCGGAGAGCTGGGGGAGGTCAGGGGCCCCCATGGCTCCCTAGAACCTTCAATTTACAGACTGAGCTGCCGCAGTTTATCAGACATTACCAGGAGAGGCAAGAGAGAGCGCTGGATAACCACTGGATCTGCAAGCCCTGGAATTTGGCTCGAGGTCTGGACACACACATCACAGACAGCCTCGACTACATAATCAGACAGCGAGAGAGCACACCTAAGGTGGTCAGTAAATATCTGGAGGACCCCGTGTTGTTTCACAGAGAGGAGGTGGGCATGGTGAAGTTTGACATCCGCTACATGGTGCTGCTGCGCTCTGTTGAACCTCTGCGCCTTTATGCATACAACGTCTTCTGGCTTCGTTTTGCTAACAAACCCTTCTCTCTAGATCATTTTGATGATTATCAGAAGCACTACACAGTGATGAATTATGCCGAGGATGTGCAGCTCAAGCAGATTCACTATGATGAATTCATCCCTATGTTTGAGAGCCAGTATCCGCAGTATGCATGGAAGCAGGTTGAGGTGGATATCTTTAGAGCATTTTCAGAGCTCTTCCAGGCAGCGTCCTGTCGTCCCGCTCCATACGGGATCTGTGCGTATCCCTCCTCCAGAGCCATATACGCCATCGACCTCATGCTGAAATGGGACCAGACCGCACAAGggGAACGTGTGATGCAGCCTCAGATACTGGAGGTGAATTTTAACCCAGATTGTAAGAGGGCCTGTCGGTATCATCCCAGCTTTTACGACCACATGTTCCAAACGCTGTTCCTGGATCAGGCAGAAGAATGTCCTATAACGATTCGACTTCTTTACGACCCCACACTTCCAACTCTTCATGGGTCAAGTCTGCCTACTCACATCCCCAAGTGATCCAGGTAACTAATTCACAATTAGTCCTTTGCAGTGGAGAAACCCTAGCAAAGCTGTGAAAGTATCCTGTAAGGTTGTTCAAATGAAACCAGGAGTAAGTGGGGTAAAGATCTAAcagtaaatatttaacaatagCATGTTTCGGTGCTTGCATTGCAGATTAAACAAGCACTGACTAACCCATGGTGTTAAATACCTGTAAATGTACCGGTCATATACATATTAAAGAGTATTTGGCGGCAAATTGGCGCAAATGGTAATGGGGATTGCCCCTCCTTATCACCTTCAAATGGTTGAAAGTATCACTACAAGGCTACTGGAGAATGTTGTTTCCCAGCCCCCATCAAAACATGCAGACAACAGCAAAAGAAAAACTGGCGCAAGCTAAAACGTAGAAAGCATCTCAAGAGTTGATCAATCAGTCTAATTAAGAAGCACACTACTTAATCTAAATTTTCACTAAGCTagtacccagcaagcatttttgtttgtttttaaaatatgtctagTAGATGTCTAAgggacgtctaaacatagtcgtcttggctaaaacaagactaaatttgggctgtcagtgaatgACAAAACTACAGTAGTCATCAGATTAACAGAAATGGATGACTACACatttaaagtctgtctaatcaGTCTTTTTgacaactagtctagttttgggctgttcTTAGTTGTCTATTAGATATTTACTGACAGCCCAGGTTTAGCCTTGTTATAGCTAAGATGTCTACATTTCGATGTCTataagacatctattaaacacaaaattgttagCTGGATACTTTGGCTGCAAAACAAAGTTTGATTTCCATTTAGCAACACAATCATATTGGCTAATTATTTGTTTCTTGGTCTTGCTCTAAAGCAACAGGTAAACAATTGTGAAGCCTTAACAGTTAACAAATGTATGACTTTTATTGCATAATTGGCATTAGGATGAAATATTGGATATCTTGGATAtatactttcatttttgggtataTTTCTGGGTACAAAAACACATCCCCAGTTTTTATACCCAGTGTAAAAAGATTAATGGATGCAAaaactggtggtggatgaagacATTcctcccaaaaatgtgtaaagcgctttgagtgtctagaaaagcactatatataaatgtagggcattatcatcattattattattattattaaaaattaatgaaatgaatgcaaaaatgcaaaaaaaaaaatcataaattttatttaaaaacatttttattgtcacAAATATGTACAGTTTGCATTGAGAGTCAAAATATTTACCAAACACATCAAATAATATAATCAAAAGCACAAAAATCATCCATAAGGATGTGAAAGACTATGTGAAAACGTTTATTGTTGTTTATCAGTGTCACTAGTATTCATGTTTTCTTTACTTTCTATAAATGCTTCTTAACTGGTAAAGCTTTTCCCTATTTCCCTCCTCTCTCCAAAGGAAACTCCACTTGAGTGACCTCATCCTTCAGGAATTTCTGTTGCCGCCTCAGCACAAAGAGCTGTAAGTGAAATTTGAgatgcattcatgtcatgtgaaCAAGCCAAAAGTATACtatcataaaaaaaacatgtaaactccttAGACAATTAGAATTTAGATCACTAGTTACAtgccaaaagaaaaaaacaacaacaacaacaatcagtATTTGTCAAATGGGTTCACACATTTAGATTTTGAACTCCAAATGCCAACCTGAGCTGCAGTCTATTTCTGCTTCTTGAGGCTCGACAAGAGTAATCTTTCAGGTTCAGATGACCTGAAGTAAGTCATTTACTCTGAGACTCGTTTAGAGATGAATAATGCATGAGCATACCAAATGGGCTCTGATGCACAATGTAACCAATGTCAGATAATCGGGTtgaaacaaaatgtacatttattacaCTGTTTTGAATACTCTAGTATCGATAAAAGAATACcataatttcataaataataagCAGTGATATTAGATCACAAATTCCTATTAATTAAAGGATATTTTGACAATCAAGTAAACCCAATTAACTATTAGAGAGAGTTTAGGCTACATTAAAAGTCAAGAGTAATTCAATTAATCAAAGAGTGGAATTAAACTAGGTAAAGTAGAATAAAATAAGCCTTCAAAGTTTTCATTGAGGAACTTTTGGCGTCTTTATTGAACTTCAGAGTTTGTATTTAGGAGTTTTTGGTGTTTTTAATGACTTAAATGAACTTTAGAGTTTGTATTAAGGTTTTTGTTGGCGTCTATAATGACTTCAGAGTTTGTATTGAGGAATTTTGATGTTTTTAATGACTTTAATGAACTTCAGAGCttgtattaaaaacattttgatgtttttaatgattttaatgaaCTTCAGAGTTTGTATTGAGTCGTTTTTTGTGTATTTACTGACTTTCATGAACTTTAAAGTTTGTATAAAGGATTTTTTTCCATCTTTAATGGCTTTAGAGTTTGTATTGAAGATTTTTTGTTGgtgtttttaaatactttaatgaACTTCAGAGTTTGTATTgaggatttttttaatgttttattgactTTAATGAACTTCAGAGTTTGTATTgaggatttttttaatgttttattgactTTAATGAACTTCAGAGTTtgtattgaggattttttttgtgtttataatgACTTTAATGAACTTCAAAGTTTGTATTGAGGAATTTACTGTGTCAATAATGACTTTATTGTGTGTCTTTAATGACCTTATTGCCTTATATGTACTTTATATGAAGTGTGTGATTTTATCACCTTATATTGTATTTCTAACGGTCTTCTCACTATTCTATGTGTGTTTGACTCTGAATCTTATCCCgtgtgtgttttactgtcatATTCTTATCTAAATATCTTATCTGATCATAAAGTAGCCATTGTCGGGTTGACTGTGTTGGGGGAAATTGTcctcaaaaattattttctgagttcataaataaatgaaacaagtcAGAAGTCCTATTTCAACCCAATATGTTGTATAACGGGATTCATATTTCTCACTGTCTGTGGTTTTTATCTCATATTCCCAGTGGCATCCTGCTTCTCTCAGCAAATAATAGACTCTCATCTGTAATTAGGAGCGAATGTATATTGTCTGTCTCTTGTTCTTCTACTTTATGGCTGCACTGCTTAGAGCGTGCTTTTCTGTAAGTTCTTGCTGCTGCTGAATAATGGCTTCTTTATGTTTAAATGACATCAGTGGGAGCTAGTAATGATGTTTAAATGAGATCTGTGAGATATGATGTAGCTGATGCATAGCATGCGCTTATCTCGTCATGAGTTGCATATTATCTGTTGTTGTCTCCATGGTTTTCTCATAGAATTAATAACTATCCTTGTGTTTTATTGGGCATTGTTTCTGTCTTGGTCAGTACATATTTTATCTAAATGCATTGCATACGCTTTATCAATCTGCAGCGCATGCACAAATTCtccttaatatataatatgtgttAAACATTAGATGAATGATTTACTGTGCTTCACTCTTTAGGTTCTGCATGTCTGTGTGTCTCATCAGTCgaagtgtttctgcaggtttttaaaagtttaacctacACTCACGAgccagcaactcaatgtatttatatcatgtagacatggtcaagatgatctcctgcagttcaaaccgagctgACCCCA
>TCONS_00055333
ACAGTACACATGTGAGTTGTCAGAAGGAAACTAGCAACATCTAAAAAGATGCAGAACGGCAGTGTAAACACAGAGGAGGATAAAGAGTATCAGCTCTTCCTCTCTCTGCACAGTCCCGCTTTAAAGGCTGCACGAATCCCTCCGCTTTACTGGAAGAGTTTGCATTTAAAACTTGCCAATGAGGTTTTTGATGCCGGTGATGTGTTTGGCATCATGCAAGTGGAGGAAGATGAAGATGGGGATGAGGAGAAAGAAAAGAGACTCAATCCTGGAGATGAGATCGCTTATAAAGTGATTGTGACCAGAGAGAGTGGTCTGCAGGCTGCGGATCCCACCAGTGTGTTTCTGGTCGATCATGCCTGGACATATAGGGTGGAAAGCGCACGTCAGCAGCTTCTGGAGATTCCTGGCCTGCTGATCAGAATGGCCAGTCTAATGTGTTTGCCTTTCCACGGAGAGGCTCCAGATCCAGATATTGTGGATCTGATACTGGACAGCATGTGGAAATACAACCAAACCTATCAGCTATCCCAGGGATCTGCAGAAGAAAAGGTGCCTGTTTGGTACATCATGGATGAATTTGGATCTCGGGTTCAGCACTCTTCACAGCCGACTTGCTGTATGGCTCCTCTGTTTTACGCTCCGCAACAGATTGCTTATTCTGTGCTGTGGCCACTGCAGAACCTGGAATATGGAGATGAGGTGACACGTGATTTTGCGTATGGAGAGACAGACCCTTTAGTCAGGAGATGCCGTCTGCTACCGTGGCTGCCTGAAGAACTGGATGCTGTGAGCGATGACGTGCAGGAACCGTCTGACCTTTACTATGAAACTATTCTACAGGAGAACAAAGAAAAGCTTCCTGTAGACATCCAGCCTTATTGTGTACCAGATGGAAAAGTGCTGAAGGTTTACACTGAGATGAAGCAGGTTTTCGATCATCTGAAACATCCACGCTTCCAGTTCACTGAAAATGAGGAAGAGGCTGACATAATCTGGGCTTTCTCCCATATCCGAGAATATCGGAAACTAAGTGAGGAACGGCCTCATGTTCTGCTCAACCAGTTCCCATGTGAGACGGTTCTTACTACTAAAGACTGCTTGGCGTCTGTGGCGCGGAGAGCTGGGGGAGGTCAGGGGCCCCCATGGCTCCCTAGAACCTTCAATTTACAGACTGAGCTGCCGCAGTTTATCAGACATTACCAGGAGAGGCAAGAGAGAGCGCTGGATAACCACTGGATCTGCAAGCCCTGGAATTTGGCTCGAGGTCTGGACACACACATCACAGACAGCCTCGACTACATAATCAGACAGCGAGAGAGCACACCTAAGGTGGTCAGTAAATATCTGGAGGACCCCGTGTTGTTTCACAGAGAGGAGGTGGGCATGGTGAAGTTTGACATCCGCTACATGGTGCTGCTGCGCTCTGTTGAACCTCTGCGCCTTTATGCATACAACGTCTTCTGGCTTCGTTTTGCTAACAAACCCTTCTCTCTAGATCATTTTGATGATTATCAGAAGCACTACACAGTGATGAATTATGCCGAGGATGTGCAGCTCAAGCAGATTCACTATGATGAATTCATCCCTATGTTTGAGAGCCAGTATCCGCAGTATGCATGGAAGCAGGTTGAGGTGGATATCTTTAGAGCATTTTCAGAGCTCTTCCAGGCAGCGTCCTGTCGTCCCGCTCCATACGGGATCTGTGCGTATCCCTCCTCCAGAGCCATATACGCCATCGACCTCATGCTGAAATGGGACCAGACCGCACAAGggGAACGTGTGATGCAGCCTCAGATACTGGAGGTGAATTTTAACCCAGATTGTAAGAGGGCCTGTCGGTATCATCCCAGCTTTTACGACCACATGTTCCAAACGCTGTTCCTGGATCAGGCAGAAGAATGTCCTGTCAGTCGCATTTTATGACCACTCTAAATTCCAACTCTAAAGATGGTCTCTGTTTACTAAATAAAGATTGCTAAGCACCTTTGAcactt

Function

symbol description
ttll12 Predicted to enable ATP binding activity. Predicted to act upstream of or within cellular protein modification process. Orthologous to human TTLL12 (tubulin tyrosine ligase like 12).

GO:

id name namespace
GO:0006464 cellular protein modification process biological_process
GO:0005524 ATP binding molecular_function

KEGG:

id description
ko04812 Cytoskeleton proteins

ZFIN:

id description
ZDB-GENE-040426-697 Predicted to enable ATP binding activity. Predicted to act upstream of or within cellular protein modification process. Orthologous to human TTLL12 (tubulin tyrosine ligase like 12).

Ensembl:

ensembl_id ENSDARG00000103537

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055332 False 5602 mRNA 0.39 15 8739093 8779141
TCONS_00055333 True 1997 mRNA 0.48 14 8743555 8779189

Neighbor

gene id symbol gene type direction distance location
XLOC_028521 BX842699.1 coding downstream 3502 8709082 ~ 8735591 (-)
XLOC_028520 BX649324.2 coding downstream 100464 8634704 ~ 8638629 (-)
XLOC_028519 fbxl14b coding downstream 127252 8609517 ~ 8611841 (-)
XLOC_028518 BX649324.1 coding downstream 151185 8587787 ~ 8587908 (-)
XLOC_028517 NA coding downstream 519102 8219461 ~ 8219991 (-)
XLOC_028523 pnpla3 coding upstream 990 8780179 ~ 8795250 (-)
XLOC_028524 mpped1 coding upstream 70627 8849816 ~ 8903240 (-)
XLOC_028525 NA coding upstream 125102 8904291 ~ 8905453 (-)
XLOC_028526 scube1 coding upstream 127704 8906893 ~ 9008851 (-)
XLOC_028527 NA coding upstream 269117 9048306 ~ 9050945 (-)
XLOC_028516 NA non-coding downstream 524658 8213170 ~ 8214435 (-)
XLOC_028533 NA non-coding upstream 609629 9388818 ~ 9389648 (-)
XLOC_028534 NA non-coding upstream 735359 9514548 ~ 9521942 (-)
XLOC_028540 BX901962.1 non-coding upstream 870094 9649283 ~ 9651968 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_00711133_00728657 TTLL12 coding CI01000066 null 711133 ~ 728657 (-)