G935570


Basic Information

Item Value
gene id G935570
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2992571 ~ 2992949 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066838
ttttggttccaaccaccatgtcttcatgagatgcagagtaggtgaacggagggTCACTGCATGTTTggttccaccgtgaagcatggaggaggaggtgtgatggtgtgggggtgctttgctggtgacactgtctttgatttatttagaattcaaggcacacttaaccagcatggctaccacagcattctgcagcgatacgccatcccatctggtttgcgcttagtgggactatcatttgtttttcaacaggacaatgtcccaacacacctccaggctgtgtaagggctatttgacaatcacccgacctcaacccaattgagatggtttatgatgagttggaccgcagagtgaaggaaaaacaccaaacaagtgctaagca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066838 True 379 lncRNA 0.48 1 2992571 2992949

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 461597 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 604979 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1137002 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1512943 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1628299 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 254877 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 409103 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 530608 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 640991 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 659846 3652795 ~ 3676466 (+)
G935532 NA non-coding upstream 31766 2960603 ~ 2960805 (+)
G935529 NA non-coding upstream 34014 2958229 ~ 2958557 (+)
G935523 NA non-coding upstream 43956 2948403 ~ 2948615 (+)
G935509 NA non-coding upstream 67044 2925294 ~ 2925527 (+)
G935500 NA non-coding upstream 73862 2917910 ~ 2918709 (+)
G935575 NA non-coding downstream 4571 2997520 ~ 2997726 (+)
G935577 NA non-coding downstream 8467 3001416 ~ 3001699 (+)
G935593 NA non-coding downstream 28214 3021163 ~ 3022098 (+)
G935617 NA non-coding downstream 46422 3039371 ~ 3040176 (+)
G935620 NA non-coding downstream 53436 3046385 ~ 3046636 (+)
G934640 NA other upstream 1083491 1908660 ~ 1909080 (+)
G934579 NA other upstream 1165205 1826627 ~ 1827366 (+)
G934256 NA other upstream 1496557 1488076 ~ 1496014 (+)
G934169 NA other upstream 1684812 1307527 ~ 1307759 (+)
G933799 NA other upstream 2040987 949531 ~ 951584 (+)
G935846 NA other downstream 557090 3550039 ~ 3550487 (+)
G935976 NA other downstream 987822 3980771 ~ 3981151 (+)
G935977 NA other downstream 988902 3981851 ~ 3982198 (+)
G937051 NA other downstream 2026956 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2150368 5143317 ~ 5144565 (+)

Expression


Co-expression Network