G935575


Basic Information

Item Value
gene id G935575
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 2997520 ~ 2997726 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066843
tgaaattagctgtgtctggtggtggttttacatatatatgtgctatgttttcgccgtaaaacattttagaaatctgacttgctggctagatgaacaagatgtttatctttcatttgagctattggacttgttaatgtgtggaggttaaatatttttaagaatatttttgcgttccatgcgccaccgtttcagctgaacgtgggaggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066843 True 207 lncRNA 0.38 1 2997520 2997726

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 466546 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 609928 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1141951 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1517892 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1633248 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 250100 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 404326 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 525831 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 636214 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 655069 3652795 ~ 3676466 (+)
G935570 NA non-coding upstream 4571 2992571 ~ 2992949 (+)
G935532 NA non-coding upstream 36715 2960603 ~ 2960805 (+)
G935529 NA non-coding upstream 38963 2958229 ~ 2958557 (+)
G935523 NA non-coding upstream 48905 2948403 ~ 2948615 (+)
G935509 NA non-coding upstream 71993 2925294 ~ 2925527 (+)
G935577 NA non-coding downstream 3690 3001416 ~ 3001699 (+)
G935593 NA non-coding downstream 23437 3021163 ~ 3022098 (+)
G935617 NA non-coding downstream 41645 3039371 ~ 3040176 (+)
G935620 NA non-coding downstream 48659 3046385 ~ 3046636 (+)
G935641 NA non-coding downstream 133907 3131633 ~ 3131888 (+)
G934640 NA other upstream 1088440 1908660 ~ 1909080 (+)
G934579 NA other upstream 1170154 1826627 ~ 1827366 (+)
G934256 NA other upstream 1501506 1488076 ~ 1496014 (+)
G934169 NA other upstream 1689761 1307527 ~ 1307759 (+)
G933799 NA other upstream 2045936 949531 ~ 951584 (+)
G935846 NA other downstream 552313 3550039 ~ 3550487 (+)
G935976 NA other downstream 983045 3980771 ~ 3981151 (+)
G935977 NA other downstream 984125 3981851 ~ 3982198 (+)
G937051 NA other downstream 2022179 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2145591 5143317 ~ 5144565 (+)

Expression


Co-expression Network