G935617


Basic Information

Item Value
gene id G935617
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3039371 ~ 3040176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066890
gttatctactgtcctgtaggttattgtcagccttgtgttacagtaatctactgtcctgtaggttattgtGCCTTGTGTTACGgtaatctactgtcctgtaggttattgtctgccttgtgttacagtaatctactgtcctgtaggttattgtgccttgtgttacagtaatctactgtcctgtaggttattgtgccttgtgttacagtaatctactgtcctgtaggttattgtcTGCCTTGTGTTACGgttatctactgtcctgtaggttattgtcTGCCTTGTGTTACAGTAATCTACTGTTCTGTAGGTTATTGTGCCTTGTGTTACAgtaatctactgtcctgtaggttattgtcTGCCTTGTGTTACGgtaatctactgtcctgtaggttattgtctgccttgtgttacagtaatctactgtcctgtaggttattgtgccttgtgttacagtaatctactgtcctgtaggttattgtcTGCCTTGTGTTACAGTAATCTACTGTTCTGTAGGTTATTGTGCCTTGTGTTACAgtaatctactgtcctgtaggttattgtcTGCCTTGTGTTACGgtaatctactgtcctgtaggttattgtctgccttgtgttacagtaatctactgtcctgtaggttattgtctgccttgtgttacagtaatctactgtcctgtaggttattgtgccttgtgttacagtaatctactgtcctgtaggttattgtctgccttgtgttacagtaatctactgtcctgtaggttattgtgccttgtgttacagtaatctactgtcctgtaggttat

Function

NR:

description
PREDICTED: uncharacterized protein LOC106594308

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066890 True 806 lncRNA 0.40 1 3039371 3040176

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 508397 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 651779 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1183802 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1559743 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1675099 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 207650 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 361876 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 483381 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 593764 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 612619 3652795 ~ 3676466 (+)
G935593 NA non-coding upstream 17273 3021163 ~ 3022098 (+)
G935577 NA non-coding upstream 37672 3001416 ~ 3001699 (+)
G935575 NA non-coding upstream 41645 2997520 ~ 2997726 (+)
G935570 NA non-coding upstream 46422 2992571 ~ 2992949 (+)
G935532 NA non-coding upstream 78566 2960603 ~ 2960805 (+)
G935620 NA non-coding downstream 6209 3046385 ~ 3046636 (+)
G935641 NA non-coding downstream 91457 3131633 ~ 3131888 (+)
G935652 NA non-coding downstream 112512 3152688 ~ 3153155 (+)
G935654 NA non-coding downstream 116416 3156592 ~ 3156830 (+)
G935658 NA non-coding downstream 117906 3158082 ~ 3158323 (+)
G934640 NA other upstream 1130291 1908660 ~ 1909080 (+)
G934579 NA other upstream 1212005 1826627 ~ 1827366 (+)
G934256 NA other upstream 1543357 1488076 ~ 1496014 (+)
G934169 NA other upstream 1731612 1307527 ~ 1307759 (+)
G933799 NA other upstream 2087787 949531 ~ 951584 (+)
G935846 NA other downstream 509863 3550039 ~ 3550487 (+)
G935976 NA other downstream 940595 3980771 ~ 3981151 (+)
G935977 NA other downstream 941675 3981851 ~ 3982198 (+)
G937051 NA other downstream 1979729 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 2103141 5143317 ~ 5144565 (+)

Expression


Co-expression Network