G935652


Basic Information

Item Value
gene id G935652
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3152688 ~ 3153155 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066928
atcaatccctataccagtctgctgttcccacatgcttcaagagggccaccattgttcctgttcccaagaaagctaaggtccacagacgatgcaatctcaaccacactgcacaccgccctaacccatctggacaagaggaatacctatgtgagaatgctgttcattgactacagctcggcattcaacaccatagtaccctccaagctcgtcatcaagctcgagaccctgggtctcgaccccgccctgtgcaactgggtactggacttcctgacgggccgcccccaggtggtgagggtaggcaacaacatctcctccccgctgatcctca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066928 True 328 lncRNA 0.55 2 3152688 3153155

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 621714 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 765096 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1297119 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1673060 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1788416 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 94671 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 248897 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 370402 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 480785 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 499640 3652795 ~ 3676466 (+)
G935641 NA non-coding upstream 20800 3131633 ~ 3131888 (+)
G935620 NA non-coding upstream 106052 3046385 ~ 3046636 (+)
G935617 NA non-coding upstream 112512 3039371 ~ 3040176 (+)
G935593 NA non-coding upstream 130590 3021163 ~ 3022098 (+)
G935577 NA non-coding upstream 150989 3001416 ~ 3001699 (+)
G935654 NA non-coding downstream 3437 3156592 ~ 3156830 (+)
G935658 NA non-coding downstream 4927 3158082 ~ 3158323 (+)
G935673 NA non-coding downstream 21983 3175138 ~ 3175347 (+)
G935680 NA non-coding downstream 27243 3180398 ~ 3181065 (+)
G935683 LOC106579747 non-coding downstream 81535 3234690 ~ 3242368 (+)
G934640 NA other upstream 1243608 1908660 ~ 1909080 (+)
G934579 NA other upstream 1325322 1826627 ~ 1827366 (+)
G934256 NA other upstream 1656674 1488076 ~ 1496014 (+)
G934169 NA other upstream 1844929 1307527 ~ 1307759 (+)
G933799 NA other upstream 2201104 949531 ~ 951584 (+)
G935846 NA other downstream 396884 3550039 ~ 3550487 (+)
G935976 NA other downstream 827616 3980771 ~ 3981151 (+)
G935977 NA other downstream 828696 3981851 ~ 3982198 (+)
G937051 NA other downstream 1866750 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1990162 5143317 ~ 5144565 (+)

Expression


Co-expression Network