G935654


Basic Information

Item Value
gene id G935654
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3156592 ~ 3156830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1066930
caaatgcttgtgtagctatggttgaaaagcatatgctgaatgctaacgctaatgctaacgctaaatgctacgctagctagctactgttacacaaattattgttttcctatggttgagaagcatattttgaaaatctgagatgacagtgttgttaacaaaaggctaagcttgtgagtgaatatatttatttcatttcatttgcgattttcatgaatagttaacgttgcgttatggtaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1066930 True 239 lncRNA 0.34 1 3156592 3156830

Neighbor

gene id symbol gene type direction distance location
plod2 LOC106579751 coding upstream 625618 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 769000 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1301023 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1676964 1389373 ~ 1479628 (+)
fam162a e2ig5 coding upstream 1792320 1352989 ~ 1364272 (+)
LOC118937290 NA coding downstream 90996 3247826 ~ 3249391 (+)
LOC118937434 NA coding downstream 245222 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 366727 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 477110 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 495965 3652795 ~ 3676466 (+)
G935652 NA non-coding upstream 3437 3152688 ~ 3153155 (+)
G935641 NA non-coding upstream 24704 3131633 ~ 3131888 (+)
G935620 NA non-coding upstream 109956 3046385 ~ 3046636 (+)
G935617 NA non-coding upstream 116416 3039371 ~ 3040176 (+)
G935593 NA non-coding upstream 134494 3021163 ~ 3022098 (+)
G935658 NA non-coding downstream 1252 3158082 ~ 3158323 (+)
G935673 NA non-coding downstream 18308 3175138 ~ 3175347 (+)
G935680 NA non-coding downstream 23568 3180398 ~ 3181065 (+)
G935683 LOC106579747 non-coding downstream 77860 3234690 ~ 3242368 (+)
G934640 NA other upstream 1247512 1908660 ~ 1909080 (+)
G934579 NA other upstream 1329226 1826627 ~ 1827366 (+)
G934256 NA other upstream 1660578 1488076 ~ 1496014 (+)
G934169 NA other upstream 1848833 1307527 ~ 1307759 (+)
G933799 NA other upstream 2205008 949531 ~ 951584 (+)
G935846 NA other downstream 393209 3550039 ~ 3550487 (+)
G935976 NA other downstream 823941 3980771 ~ 3981151 (+)
G935977 NA other downstream 825021 3981851 ~ 3982198 (+)
G937051 NA other downstream 1863075 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1986487 5143317 ~ 5144565 (+)

Expression


Co-expression Network