G935763


Basic Information

Item Value
gene id G935763
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3383848 ~ 3384910 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067064
TTTTCttgccaaaatgtatttttatttgatttaaccatTATTTCAACAGGTAAGtcgactgagaacacattctcatttacaacaacaacctggggaataggggaaaggggaaaggagaggggatgaatgagccaatacACAGCTTAGTCCATCAAATATTACCACAGCAACCAATCTACATTACCATACCAACCACTGTTAATTACCATACTAACCACACTACAATACCATACCAACCACTGTTAATTACCATACCAACCACTCTACAATACCATACCAACCACTGTTAATTACCATACCAACCACTCTACAATACCATACCAACCACTGTTAATTACCATACCATACCAACCACACTACAATACCATACCAACCACTGTTAATTACCATACTAACCACACTACAATACCATACCAACCACTCTACAATACCATACCAACCACTCTACAATACCATACCAACCACTCTACAATACCATACCAACCACTCTACAATACCATACCAACCACTCTACAATACCATACCAACCACTCTACAATACCATACCAACCACTGTTAATTAC

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067064 True 563 lncRNA 0.38 2 3383848 3384910

Neighbor

gene id symbol gene type direction distance location
LOC118937290 NA coding upstream 134457 3247826 ~ 3249391 (+)
plod2 LOC106579751 coding upstream 852874 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 996256 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1528279 1839051 ~ 1855581 (+)
nktr nktr coding upstream 1904220 1389373 ~ 1479628 (+)
LOC118937434 NA coding downstream 17142 3402052 ~ 3402867 (+)
jph1a jph1b coding downstream 138647 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 249030 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 267885 3652795 ~ 3676466 (+)
stau2 stau2 coding downstream 298964 3683874 ~ 3961133 (+)
G935748 NA non-coding upstream 43224 3340393 ~ 3340624 (+)
G935737 NA non-coding upstream 67107 3315682 ~ 3316741 (+)
G935726 NA non-coding upstream 84416 3293295 ~ 3299432 (+)
G935723 NA non-coding upstream 92966 3290403 ~ 3290882 (+)
G935722 NA non-coding upstream 95003 3287550 ~ 3288845 (+)
G935762 NA non-coding downstream 732 3385642 ~ 3387937 (+)
G935770 NA non-coding downstream 15635 3400545 ~ 3401805 (+)
G935781 NA non-coding downstream 36833 3421743 ~ 3423010 (+)
G935783 NA non-coding downstream 39818 3424728 ~ 3425204 (+)
G935798 NA non-coding downstream 67677 3452587 ~ 3452827 (+)
G934640 NA other upstream 1474768 1908660 ~ 1909080 (+)
G934579 NA other upstream 1556482 1826627 ~ 1827366 (+)
G934256 NA other upstream 1887834 1488076 ~ 1496014 (+)
G934169 NA other upstream 2076089 1307527 ~ 1307759 (+)
G933799 NA other upstream 2432264 949531 ~ 951584 (+)
G935846 NA other downstream 165129 3550039 ~ 3550487 (+)
G935976 NA other downstream 595861 3980771 ~ 3981151 (+)
G935977 NA other downstream 596941 3981851 ~ 3982198 (+)
G937051 NA other downstream 1634995 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1758407 5143317 ~ 5144565 (+)

Expression


Co-expression Network