G935798


Basic Information

Item Value
gene id G935798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3452587 ~ 3452827 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067112
CTGATACTACTGGTCCCAGTCTGTCCCTGATACTACTGGTCCCAGTCTGTCCCTGATACTACTGGTCCCAACCTGTCCCTGATTCTACTGGTCCCAGTCTGTCTCTGATACTACTGGTCCCAGTCTGTCTCTGATACTACTGGTCCCAGTCTGTCCCTGATACTACTGGTCCCAGTCTGTCCCTGATACTACTGGTCCCAACCTGTCCCTGATTCTACTGGTCCCAGTCTGTCTCTGATAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067112 True 241 lncRNA 0.52 1 3452587 3452827

Neighbor

gene id symbol gene type direction distance location
LOC118937434 NA coding upstream 49720 3402052 ~ 3402867 (+)
LOC118937290 NA coding upstream 203196 3247826 ~ 3249391 (+)
plod2 LOC106579751 coding upstream 921613 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 1064995 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1597018 1839051 ~ 1855581 (+)
jph1a jph1b coding downstream 70730 3523557 ~ 3616312 (+)
LOC110535177 tceb1 coding downstream 181113 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 199968 3652795 ~ 3676466 (+)
stau2 stau2 coding downstream 231047 3683874 ~ 3961133 (+)
LOC110536525 rpl7 coding downstream 565365 4018192 ~ 4024376 (+)
G935759 NA non-coding upstream 4678 3379557 ~ 3447909 (+)
G935783 NA non-coding upstream 27383 3424728 ~ 3425204 (+)
G935781 NA non-coding upstream 29577 3421743 ~ 3423010 (+)
G935770 NA non-coding upstream 50782 3400545 ~ 3401805 (+)
G935762 NA non-coding upstream 64650 3385642 ~ 3387937 (+)
G935800 NA non-coding downstream 1376 3454203 ~ 3454479 (+)
G935829 NA non-coding downstream 63768 3516595 ~ 3517529 (+)
G935838 NA non-coding downstream 76910 3529737 ~ 3530889 (+)
G935840 NA non-coding downstream 82182 3535009 ~ 3539585 (+)
G935849 NA non-coding downstream 103619 3556446 ~ 3556786 (+)
G934640 NA other upstream 1543507 1908660 ~ 1909080 (+)
G934579 NA other upstream 1625221 1826627 ~ 1827366 (+)
G934256 NA other upstream 1956573 1488076 ~ 1496014 (+)
G934169 NA other upstream 2144828 1307527 ~ 1307759 (+)
G933799 NA other upstream 2501003 949531 ~ 951584 (+)
G935846 NA other downstream 97212 3550039 ~ 3550487 (+)
G935976 NA other downstream 527944 3980771 ~ 3981151 (+)
G935977 NA other downstream 529024 3981851 ~ 3982198 (+)
G937051 NA other downstream 1567078 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1690490 5143317 ~ 5144565 (+)

Expression


Co-expression Network