G935849


Basic Information

Item Value
gene id G935849
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3556446 ~ 3556786 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067189
CATATTAGATTAGTGATCTGTTAGGGAACATATTAGATTAGTGATCTGTTAGGTAACTGATTAGATTAGTGATCTGTTAGGGAACATATTAGATTAGTGATCTGTTAGGTAACTGATTAGATTAGTGATCTGGGGTCTTAGACCGTTCCTCCATaaagaatctttccagatccttgatatccttcgtctgcaTTTATGGActggccctcttcaattcaaaccaggttttcaatggggttcaagatCACAGATTGAGATTGCCATCGCAAAATttagatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067189 True 279 lncRNA 0.37 2 3556446 3556786

Neighbor

gene id symbol gene type direction distance location
LOC118937434 NA coding upstream 153579 3402052 ~ 3402867 (+)
LOC118937290 NA coding upstream 307055 3247826 ~ 3249391 (+)
plod2 LOC106579751 coding upstream 1025472 2419339 ~ 2530974 (+)
si:ch73-206p6.1 LOC106579752 coding upstream 1168854 2376701 ~ 2387592 (+)
LOC110535167 LOC106579754 coding upstream 1700877 1839051 ~ 1855581 (+)
LOC110535177 tceb1 coding downstream 77154 3633940 ~ 3636886 (+)
flj11011l ube2w coding downstream 96009 3652795 ~ 3676466 (+)
stau2 stau2 coding downstream 127088 3683874 ~ 3961133 (+)
LOC110536525 rpl7 coding downstream 461406 4018192 ~ 4024376 (+)
LOC118937477 NA coding downstream 463028 4019814 ~ 4019908 (+)
G935840 NA non-coding upstream 16861 3535009 ~ 3539585 (+)
G935838 NA non-coding upstream 25557 3529737 ~ 3530889 (+)
G935829 NA non-coding upstream 38917 3516595 ~ 3517529 (+)
G935800 NA non-coding upstream 101967 3454203 ~ 3454479 (+)
G935798 NA non-coding upstream 103619 3452587 ~ 3452827 (+)
G935887 NA non-coding downstream 105533 3662319 ~ 3663078 (+)
G935896 NA non-coding downstream 138629 3695415 ~ 3695781 (+)
G935924 NA non-coding downstream 225713 3782499 ~ 3782780 (+)
G935925 NA non-coding downstream 227916 3784702 ~ 3864827 (+)
G935929 NA non-coding downstream 237504 3794290 ~ 3795252 (+)
G935846 NA other upstream 5959 3550039 ~ 3550487 (+)
G934640 NA other upstream 1647366 1908660 ~ 1909080 (+)
G934579 NA other upstream 1729080 1826627 ~ 1827366 (+)
G934256 NA other upstream 2060432 1488076 ~ 1496014 (+)
G934169 NA other upstream 2248687 1307527 ~ 1307759 (+)
G935976 NA other downstream 423985 3980771 ~ 3981151 (+)
G935977 NA other downstream 425065 3981851 ~ 3982198 (+)
G937051 NA other downstream 1463119 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1586531 5143317 ~ 5144565 (+)
G937237 NA other downstream 1947918 5504704 ~ 5505329 (+)

Expression


Co-expression Network