Gene
RNA
| Item | Value |
|---|---|
| gene id | G936172 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 3675330 ~ 3677640 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: proline-rich protein 2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1067598 | False | 2235 | lncRNA | 0.40 | 2 | 3675330 | 3677640 |
| TU1067599 | False | 2271 | lncRNA | 0.40 | 2 | 3675330 | 3677640 |
| TU1067600 | False | 2237 | lncRNA | 0.41 | 2 | 3675330 | 3677640 |
| TU1067601 | False | 2148 | lncRNA | 0.40 | 2 | 3675330 | 3677640 |
| TU1067602 | True | 2041 | lncRNA | 0.41 | 2 | 3675330 | 3677640 |
3,671,000
3,672,000
3,673,000
3,674,000
3,675,000
3,676,000
3,677,000
3,678,000
3,679,000
NC_048575.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gdap1 | gdap1 | coding | downstream | 153127 | 3503419 ~ 3522203 (-) |
| LOC110535172 | LOC106590674 | coding | downstream | 280032 | 3385591 ~ 3395298 (-) |
| LOC110535171 | LOC106579747 | coding | downstream | 339750 | 3237167 ~ 3335580 (-) |
| LOC110535166 | zic1 | coding | downstream | 1838181 | 1833705 ~ 1837149 (-) |
| LOC118937289 | NA | coding | downstream | 2232540 | 1440319 ~ 1442799 (-) |
| LOC110536524 | rdh10 | coding | upstream | 319803 | 3994738 ~ 4015695 (-) |
| terf1 | terf1 | coding | upstream | 357107 | 4034747 ~ 4046502 (-) |
| LOC110535180 | LOC106909841 | coding | upstream | 401171 | 4078811 ~ 4087304 (-) |
| LOC110536526 | kcnb2 | coding | upstream | 684094 | 4361734 ~ 4376996 (-) |
| LOC110498599 | xkr9 | coding | upstream | 1466591 | 5144231 ~ 5161121 (-) |
| G936192 | NA | non-coding | downstream | 8637 | 3666407 ~ 3666693 (-) |
| G936175 | tceb1 | non-coding | downstream | 38447 | 3633818 ~ 3636883 (-) |
| G936167 | NA | non-coding | downstream | 55208 | 3615989 ~ 3620122 (-) |
| G936155 | NA | non-coding | downstream | 113015 | 3561672 ~ 3562315 (-) |
| G936145 | NA | non-coding | downstream | 131260 | 3543632 ~ 3544070 (-) |
| G936171 | NA | non-coding | upstream | 72 | 3677712 ~ 3757874 (-) |
| G936208 | NA | non-coding | upstream | 14536 | 3692176 ~ 3692501 (-) |
| G936212 | NA | non-coding | upstream | 21151 | 3698791 ~ 3700304 (-) |
| G936222 | NA | non-coding | upstream | 38769 | 3716409 ~ 3717376 (-) |
| G936243 | NA | non-coding | upstream | 115696 | 3793336 ~ 3793837 (-) |
| G936144 | NA | other | downstream | 132011 | 3541428 ~ 3543319 (-) |
| G935247 | NA | other | downstream | 1010606 | 2664346 ~ 2664724 (-) |
| G935113 | NA | other | downstream | 1234137 | 2437224 ~ 2441193 (-) |
| G934268 | NA | other | downstream | 2107280 | 1563594 ~ 1582122 (-) |
| G934062 | NA | other | downstream | 2516324 | 1157286 ~ 1159006 (-) |
| G936199 | stau2 | other | upstream | 10133 | 3687773 ~ 3781667 (-) |
| G936486 | NA | other | upstream | 387876 | 4065516 ~ 4068749 (-) |
| G937256 | NA | other | upstream | 1364187 | 5041827 ~ 5042699 (-) |
| LOC110536541 | LOC106590236 | other | upstream | 2121669 | 5745494 ~ 5912106 (-) |
