G935896


Basic Information

Item Value
gene id G935896
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 3695415 ~ 3695781 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067243
cAGTCGTAGGCCTCAGTCCATCCAGACAGTACCAGGGTTAGAGGTGGACAGTCGTAGGCCTCAGTCCATCCAGACAGTACCAGGGTCAGAGGAGGACAGTCGTGGGCCTCAGCCCGTCCTGACAGTAccagggtcagtaccagggtTAGAGGACAGCCGTGGGCTTCGGCCCATCCAGACAGTACCAGGGACAGtaccagggttagaggag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067243 True 211 lncRNA 0.60 2 3695415 3695781

Neighbor

gene id symbol gene type direction distance location
flj11011l ube2w coding upstream 18949 3652795 ~ 3676466 (+)
LOC110535177 tceb1 coding upstream 58529 3633940 ~ 3636886 (+)
jph1a jph1b coding upstream 79103 3523557 ~ 3616312 (+)
LOC118937434 NA coding upstream 292548 3402052 ~ 3402867 (+)
LOC118937290 NA coding upstream 446024 3247826 ~ 3249391 (+)
LOC110536525 rpl7 coding downstream 322411 4018192 ~ 4024376 (+)
LOC118937477 NA coding downstream 324033 4019814 ~ 4019908 (+)
LOC118937478 NA coding downstream 324699 4020480 ~ 4020575 (+)
LOC118937479 NA coding downstream 325459 4021240 ~ 4021332 (+)
LOC118937480 NA coding downstream 327816 4023597 ~ 4023692 (+)
G935887 NA non-coding upstream 32337 3662319 ~ 3663078 (+)
G935849 NA non-coding upstream 138629 3556446 ~ 3556786 (+)
G935840 NA non-coding upstream 155830 3535009 ~ 3539585 (+)
G935838 NA non-coding upstream 164526 3529737 ~ 3530889 (+)
G935829 NA non-coding upstream 177886 3516595 ~ 3517529 (+)
G935924 NA non-coding downstream 86718 3782499 ~ 3782780 (+)
G935925 NA non-coding downstream 88921 3784702 ~ 3864827 (+)
G935929 NA non-coding downstream 98509 3794290 ~ 3795252 (+)
G935932 NA non-coding downstream 107475 3803256 ~ 3805084 (+)
G935935 NA non-coding downstream 135130 3830911 ~ 3832002 (+)
G935846 NA other upstream 144928 3550039 ~ 3550487 (+)
G934640 NA other upstream 1786335 1908660 ~ 1909080 (+)
G934579 NA other upstream 1868049 1826627 ~ 1827366 (+)
G934256 NA other upstream 2199401 1488076 ~ 1496014 (+)
G934169 NA other upstream 2387656 1307527 ~ 1307759 (+)
G935976 NA other downstream 284990 3980771 ~ 3981151 (+)
G935977 NA other downstream 286070 3981851 ~ 3982198 (+)
G937051 NA other downstream 1324124 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1447536 5143317 ~ 5144565 (+)
G937237 NA other downstream 1808923 5504704 ~ 5505329 (+)

Expression


Co-expression Network