XLOC_028532 (C4H12orf66)


Basic Information

Item Value
gene id XLOC_028532
gene name C4H12orf66
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 9339067 ~ 9350585 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055347
GTGTTGTTGTTGAAAAGTGTCATGGTGGCGTTCACCACTAAGAATGTGCATTTTATCAACAGAAGACCTTTTGAATCCCTTTGAATTGGCTGGTGTGGATTGTTTTGGACTTTTAGACTGTCGGGCACTACACACCGCTCACAGCATACGTTTTCAGCGGTCGTTTAATAACTGTCGCGTTAATGATCAGCATTCGTGAGTTCTCCATATTATCATGTGTGACCCGCAGCGCGATGAGGAACTGCGGCCGGTCCCGAAAGAGAGAGCCGTGCTGGAGAGTTTCTTCACTCAGCTCGGAATGTTCTGGTTCGACAGGGCGAAGGATTATGTGGAGAAGGAGAAGGACGCCAGTAAGAGCGCAGGGGCCATTTGGGGGTCTCTGCTGGCCGCCCTCGCGCACCTGGCGGCCGCAGAGAAAGCCTACCATAACATGACTTTCCTCGGCCAAAAACTAGGTGGTCAGTCGTTCTTCAGCCGTAAAGACTCCATCAGGACCATCTACACGTCTCTGCACAACGAGCTGAAGAAGGTGGTGTCCATGGGCCGCCACGCACCTGGAGGATCCACTCCCAACCTGGAGGAGCTGCTGCCGCACCTGTCCGAGCAGCTGTGCCACTTCACGCAGGCCCGCATGGAGATCGCAGACTTCTACGAGAAGATGCACACTCTGGGCAGCCAGAAGACTGTCAACTCTGAGGAGTTGGTGGGCGCGCTGGACAGCATCCTGCAGAAATACAGCTCCAGATTCCACCATCCAATCCTGAGCCGCCTGGAGAGCAGCTTCCAGGTGGAGGTGGATGTGTTGACGCAGCTGCTGCGATGCCAAGCACAAATCTCTGAGTGGCATTTCCTCCCATCCCTGCTAAATCTACACGGCGCCCATTCCAAGCTTCAGGCTTGGGGTCAAGTGTTTGAACGGCAGCGGGAAACCAGGAAACACCTCTTTGGAGGCCAATCCCAGAAGGCCGTGCAGCCGCCACACCTCTTTCTATGGCTGCAGCGGCTTCAAGCGACGCTCCTAGCAAAGTTCAGCTTCTACTTCCATGAGGCGCTCAGCCGGCAAACATCCCAGTCCGAAATGAAAACTCTAACAGCTCGAACCTCCCTCGATTACTTCGGAAAGATCTCCGGCTTCATTCGAAAGTACGACGCTTCGAATGTCTCCCTAGTCTTCGATAACCGTGGCTCTGAGAGCTTCCAAGGCCACGGATACCACCATCCGCAATCATATCGCGAAGCTCCCAAAGGCGTAGACCAGTTTCCGGCTGTTGTGTCACTTCCTGGTGGAGAACGACCGGTTACGCATTGGCCCAATGTTATCATGATCATGAGCGATCGCTCTACAGAGCTCAACACACTGGATAAGGTGGTCCACTTTTACGATGATAAAGTCCAAAGCACGTATTTTTTGGCTCGTCCCGAACCGCACTTCACCATCGTTGTGATTTTCGACGGGAGGAAGTCCGAAAGAGACTCGTACATCGTGGCTTTCCTGCAGGAGCTGATAGGATCCCTGAGGAACTCCAAACCCTTCACTTCACTCAAACCAGGATCCAAAGGCTAAGCTTTTTCACCGTTAACAATTTCCGACGAAGTATAGTTTGTTTTAAATTGACATTAGCCTTGATGTTGGTTGATGTTCTTTTTATTCACCGTGTTGTCGTTTTATTTTAGAATGACTACCGAAGAGGTCCAAAAGCTTTCGAGACACTTTCAGACCAAAGAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000045790

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055347 True 1726 mRNA 0.52 3 9339067 9350585

Neighbor

gene id symbol gene type direction distance location
XLOC_028531 avpr1ab coding downstream 124779 9207722 ~ 9214288 (-)
XLOC_028530 hcfc2 coding downstream 142776 9184481 ~ 9196291 (-)
XLOC_028529 chst11 coding downstream 165515 9103182 ~ 9173552 (-)
XLOC_028528 si:dkey-48p11.3 coding downstream 284120 9051588 ~ 9054947 (-)
XLOC_028527 NA coding downstream 288122 9048306 ~ 9050945 (-)
XLOC_028533 NA coding upstream 38233 9388818 ~ 9389648 (-)
XLOC_028534 NA coding upstream 163963 9514548 ~ 9521942 (-)
XLOC_028535 si:ch73-139j3.4 coding upstream 174220 9524805 ~ 9533345 (-)
XLOC_028536 tymp coding upstream 192874 9543459 ~ 9549693 (-)
XLOC_028537 shank3b coding upstream 204695 9555280 ~ 9586713 (-)
XLOC_028525 NA non-coding downstream 433614 8904291 ~ 8905453 (-)
XLOC_028521 BX842699.1 non-coding downstream 603476 8709082 ~ 8735591 (-)
XLOC_028520 BX649324.2 non-coding downstream 700438 8634704 ~ 8638629 (-)
XLOC_028518 BX649324.1 non-coding downstream 751159 8587787 ~ 8587908 (-)
XLOC_028540 BX901962.1 non-coding upstream 298698 9649283 ~ 9651968 (-)
XLOC_028551 NA non-coding upstream 996153 10346738 ~ 10348612 (-)
XLOC_028553 BX897748.1 non-coding upstream 1310976 10661561 ~ 10661677 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000066_01152726_01162533 C18H12ORF66, CLG8H12ORF66, C19H12ORF66, CUNH12ORF66, CSSA07H12ORF66, CLG23H12ORF66 coding CI01000066 null 1152331 ~ 1162533 (-)