Gene
RNA
| Item | Value |
|---|---|
| gene id | G936349 |
| gene name | rpl7 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 4018717 ~ 4024422 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rpl7 | Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Acts upstream of or within regulation of cell cycle. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL7 (ribosomal protein L7). |
| description |
|---|
| 60S ribosomal protein L7-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1067823 | False | 807 | lncRNA | 0.46 | 2 | 4018717 | 4019959 |
| TU1067826 | False | 1411 | lncRNA | 0.51 | 6 | 4018717 | 4023291 |
| TU1067827 | False | 866 | lncRNA | 0.54 | 6 | 4018717 | 4024422 |
| TU1067830 | False | 809 | lncRNA | 0.46 | 2 | 4018717 | 4019959 |
| TU1067831 | False | 866 | lncRNA | 0.54 | 6 | 4018717 | 4024422 |
| TU1067832 | False | 864 | lncRNA | 0.54 | 6 | 4018717 | 4024422 |
| TU1067828 | False | 582 | lncRNA | 0.54 | 4 | 4019995 | 4024422 |
| TU1067824 | True | 1098 | lncRNA | 0.47 | 4 | 4020813 | 4024422 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536524 | rdh10 | coding | downstream | 3022 | 3994738 ~ 4015695 (-) |
| gdap1 | gdap1 | coding | downstream | 496514 | 3503419 ~ 3522203 (-) |
| LOC110535172 | LOC106590674 | coding | downstream | 623419 | 3385591 ~ 3395298 (-) |
| LOC110535171 | LOC106579747 | coding | downstream | 683137 | 3237167 ~ 3335580 (-) |
| LOC110535166 | zic1 | coding | downstream | 2181568 | 1833705 ~ 1837149 (-) |
| terf1 | terf1 | coding | upstream | 10325 | 4034747 ~ 4046502 (-) |
| LOC110535180 | LOC106909841 | coding | upstream | 54389 | 4078811 ~ 4087304 (-) |
| LOC110536526 | kcnb2 | coding | upstream | 337312 | 4361734 ~ 4376996 (-) |
| LOC110498599 | xkr9 | coding | upstream | 1119809 | 5144231 ~ 5161121 (-) |
| LOC118937461 | NA | coding | upstream | 1487369 | 5511791 ~ 5514088 (-) |
| G936333 | NA | non-coding | downstream | 25266 | 3992681 ~ 3993451 (-) |
| G936332 | NA | non-coding | downstream | 28076 | 3990433 ~ 3990641 (-) |
| G936331 | NA | non-coding | downstream | 28746 | 3989702 ~ 3989971 (-) |
| G936330 | NA | non-coding | downstream | 32561 | 3985942 ~ 3986156 (-) |
| G936328 | NA | non-coding | downstream | 35009 | 3983373 ~ 3983708 (-) |
| G936486 | NA | non-coding | upstream | 41138 | 4065516 ~ 4068749 (-) |
| G936506 | NA | non-coding | upstream | 76711 | 4101133 ~ 4103443 (-) |
| G936514 | NA | non-coding | upstream | 100123 | 4124545 ~ 4125191 (-) |
| G936523 | NA | non-coding | upstream | 148407 | 4172829 ~ 4175624 (-) |
| G936516 | NA | non-coding | upstream | 155699 | 4180121 ~ 4182594 (-) |
| G936199 | stau2 | other | downstream | 237050 | 3687773 ~ 3781667 (-) |
| G936144 | NA | other | downstream | 475398 | 3541428 ~ 3543319 (-) |
| G935247 | NA | other | downstream | 1353993 | 2664346 ~ 2664724 (-) |
| G935113 | NA | other | downstream | 1577524 | 2437224 ~ 2441193 (-) |
| G937256 | NA | other | upstream | 1017405 | 5041827 ~ 5042699 (-) |
| LOC110536541 | LOC106590236 | other | upstream | 1774887 | 5745494 ~ 5912106 (-) |
| G938130 | NA | other | upstream | 2074968 | 6099390 ~ 6100232 (-) |
| G938277 | NA | other | upstream | 2441491 | 6465913 ~ 6466685 (-) |
