G936007



Basic Information


Item Value
gene id G936007
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4035688 ~ 4035976 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1067376
TATTACATCTGGATAGATAGTAAATATACATTGTGTAACTATTATAGAACATGAACATTTAAACTCTActttacagagagagacagagagagagagaactttacagggacaaacagagagagagagagagagagagagaactttacagggacaaacagagagagagagagagaGAGAACTTTAcagggacaaacagagagagaga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1067376 True 205 lncRNA 0.38 3 4035688 4035976

Neighbor


gene id symbol gene type direction distance location
LOC110536525 rpl7 coding upstream 11312 4018192 ~ 4024376 (+)
LOC118937480 NA coding upstream 11996 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 14356 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 15113 4020480 ~ 4020575 (+)
LOC118937477 NA coding upstream 15780 4019814 ~ 4019908 (+)
LOC118937460 NA coding downstream 73436 4109412 ~ 4117403 (+)
LOC110536527 trpa1 coding downstream 455792 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 547640 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 783769 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 923068 4959044 ~ 4963664 (+)
G936000 NA non-coding upstream 556 4015976 ~ 4035132 (+)
G935999 NA non-coding upstream 1403 4031559 ~ 4034285 (+)
G935998 rdh10 non-coding upstream 21690 4012766 ~ 4013998 (+)
G935989 NA non-coding upstream 38344 3994999 ~ 3997344 (+)
G935984 NA non-coding upstream 43702 3991779 ~ 3991986 (+)
G936361 NA non-coding downstream 31634 4067610 ~ 4072748 (+)
G936387 NA non-coding downstream 86749 4122725 ~ 4123116 (+)
G936392 NA non-coding downstream 95745 4131721 ~ 4131920 (+)
G936412 NA non-coding downstream 151984 4187960 ~ 4188162 (+)
G936420 NA non-coding downstream 186079 4222055 ~ 4222350 (+)
G935977 NA other upstream 53490 3981851 ~ 3982198 (+)
G935976 NA other upstream 54537 3980771 ~ 3981151 (+)
G935846 NA other upstream 485201 3550039 ~ 3550487 (+)
G934640 NA other upstream 2126608 1908660 ~ 1909080 (+)
G934579 NA other upstream 2208322 1826627 ~ 1827366 (+)
G937051 NA other downstream 983929 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1107341 5143317 ~ 5144565 (+)
G937237 NA other downstream 1468728 5504704 ~ 5505329 (+)
G937889 NA other downstream 2085608 6121584 ~ 6122269 (+)
G938723 NA other downstream 2983175 7019151 ~ 7021424 (+)

Expression



Co-expression Network