G936387


Basic Information

Item Value
gene id G936387
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4122725 ~ 4123116 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067879
GATTCTGATTCATTATATACCAGCAGGAGTCTATCAACTCCATCTGATTCTGATTCATTATATATCAGTAGGAGTCTAACAACTGCATCTGATTCTGATTCATTATATACCAGCAGGAGTCTAACAACTCCATCTGATTCTGATTCATTATATATCAGCACGAGTCTATCAACTCCATCTGATTCTGATTCATTATATATCAGCAGGAGTCTATAAACTCCATCTGATTCACAGAGACCCTGTTATGAGCAGGTCCAAAGCCTAGCACAATATCTCAGATAACACATTAAGGGTGGTAGACTGTAACCAGTGATCCTATATCTCTGATAACCCATTAAGGGTGGTAGACTGTAACCCCTGACCCTATATCTCTGATTACCCATTAAGGGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067879 True 392 lncRNA 0.39 1 4122725 4123116

Neighbor

gene id symbol gene type direction distance location
LOC118937460 NA coding upstream 5322 4109412 ~ 4117403 (+)
LOC110536525 rpl7 coding upstream 98349 4018192 ~ 4024376 (+)
LOC118937480 NA coding upstream 99033 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 101393 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 102150 4020480 ~ 4020575 (+)
LOC110536527 trpa1 coding downstream 368652 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 460500 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 696629 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 835928 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 1045771 5168887 ~ 5184807 (+)
G936361 NA non-coding upstream 49977 4067610 ~ 4072748 (+)
G936007 NA non-coding upstream 86749 4035688 ~ 4035976 (+)
G936000 NA non-coding upstream 87593 4015976 ~ 4035132 (+)
G935999 NA non-coding upstream 88440 4031559 ~ 4034285 (+)
G935998 rdh10 non-coding upstream 108727 4012766 ~ 4013998 (+)
G936392 NA non-coding downstream 8605 4131721 ~ 4131920 (+)
G936412 NA non-coding downstream 64844 4187960 ~ 4188162 (+)
G936420 NA non-coding downstream 98939 4222055 ~ 4222350 (+)
G936421 NA non-coding downstream 99375 4222491 ~ 4222707 (+)
G936423 NA non-coding downstream 100834 4223950 ~ 4224202 (+)
G935977 NA other upstream 140527 3981851 ~ 3982198 (+)
G935976 NA other upstream 141574 3980771 ~ 3981151 (+)
G935846 NA other upstream 572238 3550039 ~ 3550487 (+)
G934640 NA other upstream 2213645 1908660 ~ 1909080 (+)
G934579 NA other upstream 2295359 1826627 ~ 1827366 (+)
G937051 NA other downstream 896789 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 1020201 5143317 ~ 5144565 (+)
G937237 NA other downstream 1381588 5504704 ~ 5505329 (+)
G937889 NA other downstream 1998468 6121584 ~ 6122269 (+)
G938723 NA other downstream 2896035 7019151 ~ 7021424 (+)

Expression


Co-expression Network