G936421


Basic Information

Item Value
gene id G936421
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4222491 ~ 4222707 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067922
gataaatactgagttaaatagttaaccaaatagctaccgaACTATCTGCATCAACCCTTTTGGCACTAAGTCTTTTGACTCATTACagatgctgctgctactgtctattatctatcctgttgcctagtcactttatccctacctatatgtacctGTCTACCTcagttacctggtacccctgcacatagactcagtactggtactcactgtatataac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067922 True 217 lncRNA 0.40 1 4222491 4222707

Neighbor

gene id symbol gene type direction distance location
LOC118937460 NA coding upstream 105088 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 198799 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 201159 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 201916 4020480 ~ 4020575 (+)
LOC118937477 NA coding upstream 202583 4019814 ~ 4019908 (+)
LOC110536527 trpa1 coding downstream 269061 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 360909 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 597038 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 736337 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 946180 5168887 ~ 5184807 (+)
G936420 NA non-coding upstream 141 4222055 ~ 4222350 (+)
G936412 NA non-coding upstream 34329 4187960 ~ 4188162 (+)
G936392 NA non-coding upstream 90571 4131721 ~ 4131920 (+)
G936387 NA non-coding upstream 99375 4122725 ~ 4123116 (+)
G936361 NA non-coding upstream 149743 4067610 ~ 4072748 (+)
G936423 NA non-coding downstream 1243 4223950 ~ 4224202 (+)
G936427 NA non-coding downstream 10278 4232985 ~ 4233211 (+)
G936428 NA non-coding downstream 12361 4235068 ~ 4235606 (+)
G936435 NA non-coding downstream 30092 4252799 ~ 4256144 (+)
G936436 NA non-coding downstream 43745 4266452 ~ 4266706 (+)
G935977 NA other upstream 240293 3981851 ~ 3982198 (+)
G935976 NA other upstream 241340 3980771 ~ 3981151 (+)
G935846 NA other upstream 672004 3550039 ~ 3550487 (+)
G934640 NA other upstream 2313411 1908660 ~ 1909080 (+)
G934579 NA other upstream 2395125 1826627 ~ 1827366 (+)
G937051 NA other downstream 797198 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 920610 5143317 ~ 5144565 (+)
G937237 NA other downstream 1281997 5504704 ~ 5505329 (+)
G937889 NA other downstream 1898877 6121584 ~ 6122269 (+)
G938723 NA other downstream 2796444 7019151 ~ 7021424 (+)

Expression


Co-expression Network