G936435


Basic Information

Item Value
gene id G936435
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4252799 ~ 4256144 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067938
gtggtagacaggtgtagtagtagttaccaggtgtagtagtagttaacaggtgtagtagtagtagacaggtgtagtagttgtcaacaggtgtagtagtagtagacaggtgtagtagtagttaacaggtgtagtagtagtagacaggtgtagtagtagtcAACAGATTTAGTGGTAGTATGGCTGTATTATGCAGGGTGATATGGTTGTATTATGTAGGGTGATATGGTATGGCTGTGAAATGCAGGGTGATATGGTATGGCTGTATTATGCAGGGTGATATGGTATGGCTGTGAAATGCAGGGTGATATGGTATGGCTGTATTATGTAGGGTGATATGGTATGGCTGTATTATGTAGGGTGATATGGTATGGCTGTATTATGCAGGGTGATATGGTATGGTTGTATTATGTAGGGTGATATGGTATGGCTGTATTATGTAGGGTGATATGGTATGGCTGTATTATGCAGGGTGATATGGTATGGCTGTATTATGCAGGGTGATATGGTATGGTTGTATTATGCAGGGTGATATGGCTGTATTATGCAgggtgatatggtgtggttgtatTATGTAGGGCGGAATTACAGCACCATTAGAAATTCAGCAATTCTTTTTCCCCGCCCGCAAccttttcccacaatgcaccaacATTTCAGAGAGTTTGACTTTGATAATACCCTAAATTACCATAGAAATTACAGTTTTACTTTACAGCGTACTTTCTCTTCTCAATCACACAAGACAGGtgtctccgtctttctctctctgccagaCTGAGTGACTCTCGTCCACTGTCACGCCCACCACCACCGCCACACATCAATCTCCCCAGCGCCTGGCATTATGGGTAATAT

Function

NR:

description
PREDICTED: putative proline-rich protein 21

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067938 True 855 lncRNA 0.43 4 4252799 4256144

Neighbor

gene id symbol gene type direction distance location
LOC118937460 NA coding upstream 135396 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 229107 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 231467 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 232224 4020480 ~ 4020575 (+)
LOC118937477 NA coding upstream 232891 4019814 ~ 4019908 (+)
LOC110536527 trpa1 coding downstream 235624 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 327472 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 563601 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 702900 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 912743 5168887 ~ 5184807 (+)
G936428 NA non-coding upstream 17193 4235068 ~ 4235606 (+)
G936427 NA non-coding upstream 19588 4232985 ~ 4233211 (+)
G936423 NA non-coding upstream 28597 4223950 ~ 4224202 (+)
G936421 NA non-coding upstream 30092 4222491 ~ 4222707 (+)
G936420 NA non-coding upstream 30449 4222055 ~ 4222350 (+)
G936436 NA non-coding downstream 10308 4266452 ~ 4266706 (+)
G936437 NA non-coding downstream 15425 4271569 ~ 4271802 (+)
G936438 NA non-coding downstream 17443 4273587 ~ 4273823 (+)
G936439 NA non-coding downstream 18935 4275079 ~ 4275278 (+)
G936440 NA non-coding downstream 24102 4280246 ~ 4280465 (+)
G935977 NA other upstream 270601 3981851 ~ 3982198 (+)
G935976 NA other upstream 271648 3980771 ~ 3981151 (+)
G935846 NA other upstream 702312 3550039 ~ 3550487 (+)
G934640 NA other upstream 2343719 1908660 ~ 1909080 (+)
G934579 NA other upstream 2425433 1826627 ~ 1827366 (+)
G937051 NA other downstream 763761 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 887173 5143317 ~ 5144565 (+)
G937237 NA other downstream 1248560 5504704 ~ 5505329 (+)
G937889 NA other downstream 1865440 6121584 ~ 6122269 (+)
G938723 NA other downstream 2763007 7019151 ~ 7021424 (+)

Expression


Co-expression Network