G936452


Basic Information

Item Value
gene id G936452
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4331465 ~ 4331788 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1067965
cgtcaaaatctggggtgtgaactaggtttcttttcaagcgttgatcgacatggtaacggctctgtagtattggagaaaagtttaaaacaaactgaccctccgttacatcgtgacatgtcatgtcgtaacgtacagcataaagcaactatttcaaatcaaatttatttatatagcccttcgtacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacctgcaggtgtcttacaatctctctccaccaggtggagcacttctctcatcgtttagaaacaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1067965 True 324 lncRNA 0.42 1 4331465 4331788

Neighbor

gene id symbol gene type direction distance location
LOC118937460 NA coding upstream 214062 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 307773 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 310133 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 310890 4020480 ~ 4020575 (+)
LOC118937477 NA coding upstream 311557 4019814 ~ 4019908 (+)
LOC110536527 trpa1 coding downstream 159980 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 251828 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 487957 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 627256 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 837099 5168887 ~ 5184807 (+)
G936449 NA non-coding upstream 7233 4319579 ~ 4324232 (+)
G936444 NA non-coding upstream 26663 4304588 ~ 4304802 (+)
G936440 NA non-coding upstream 51000 4280246 ~ 4280465 (+)
G936439 NA non-coding upstream 56187 4275079 ~ 4275278 (+)
G936438 NA non-coding upstream 57642 4273587 ~ 4273823 (+)
G936459 NA non-coding downstream 11115 4342903 ~ 4344147 (+)
G936470 NA non-coding downstream 35164 4366952 ~ 4401418 (+)
G936477 NA non-coding downstream 52602 4384390 ~ 4385052 (+)
G936613 NA non-coding downstream 70858 4402646 ~ 4404224 (+)
G936614 NA non-coding downstream 72615 4404403 ~ 4405069 (+)
G935977 NA other upstream 349267 3981851 ~ 3982198 (+)
G935976 NA other upstream 350314 3980771 ~ 3981151 (+)
G935846 NA other upstream 780978 3550039 ~ 3550487 (+)
G934640 NA other upstream 2422385 1908660 ~ 1909080 (+)
G934579 NA other upstream 2504099 1826627 ~ 1827366 (+)
G937051 NA other downstream 688117 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 811529 5143317 ~ 5144565 (+)
G937237 NA other downstream 1172916 5504704 ~ 5505329 (+)
G937889 NA other downstream 1789796 6121584 ~ 6122269 (+)
G938723 NA other downstream 2687363 7019151 ~ 7021424 (+)

Expression


Co-expression Network