XLOC_028537 (shank3b)


Basic Information

Item Value
gene id XLOC_028537
gene name shank3b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 9555280 ~ 9586713 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055350
TCTCTatacgctctctctctctctctcacacacacacacacagtcagtgtATCATGCTTGCACTGTGTGGGCTGAGCTGAGCATTCCTGTCATACAGTAACAGTCTCTCTGCCTCCgcactctctctctttccctaTCTCTCCCTCTATTTCTCTCTTTCCCTTTCCCTCTATCTCTCctcttttctccctctcttctctttctcacacacatacgttccaaatacacacattaacacacttaTAGACTTTCACAGACCAGAGAAGGACCCTCTGAGAGGAAGTCGAGATGGTGTGGAATGTGTGCCCTGGTTTTATTAGGGTTGTGAGGCCGGCGTGTTGAGCAgaacgcacacacactctcacacacacactctctcccgGAGCATGCCTATCAGTCCACCTGCCGACGGCAAACATGAGGCTCTCGACCGGCCGTGGCAACAACACGCCCCTACCAACGGTAACCACGGAGATGACAGTATTCGGACCTCTCCTGGGAGTAAATGTGGCTCCGAACCTATGGAGGATCTCCACGGAAACGCAGTTGTCATCCGCATCGGAATCCCTGATCTGCAGCAAACGAAATGCCTGCGATTGGACCTTGAGGCTCCAGTGTGGGTTTGTAAGCAGCGAGTACTGGTCACTCTGACACAAAGCCTGACCGATGTGCTTAACTATGGCCTCTACCTCCCTGCCTTTAATGGGCGTGCCGGAAAGTTCCTCGATGAGGAGAGATTGCTCAGGGAGTATCCTCTCCCTACGGTCACACCTGTACCATACCTAGAGTTCCGTTACAAGAGGCGTGTTTACACTCAGAGCCATGTAGATGACAAGCAACTGGCCAAATTGCACACTAAGGCAAATTTAAAGAAGTTTATGGAGTATGTTCAGCAGAGGTGTGTGGATAAGGTCTGCCGGTTCCTGGAAAAAGGGCTGGACCCCAACTTTCATGATAGTGACAGCGGAGAATCTCCTCTCACTCTCGTGGCCCAGCTGGACACTTGTGCCGATCTGATTAAAGTGTTGAGAAGCGGAGGAGCCCATCTGGACTTCAGAACCAGAGACGGCTTGACGGCGCTGCACAAAGCGGCCCAAACGCACAACCATGTAGCATTGACTACATTGTTGGATCTGGGAGCGTCTCCGGACTATAAGGACAGTCGTGGGCTCACCCCGTTATATCACAGTGCCATGGTTGGGGGAGATCCTTACTGCTGCGAGCTGCTGCTTTATGATCACGCTCAGCTGGGCTACAGCGATGAGAACGGCTGGCAGGAGATCCATCAGGCTTGTCGTCATGGAAACGTGCAGCACCTTGAGCACCTGTTATTCTATGGAGCGGAGATGAGCGCTCAGAACGCCTCAGGAAACACAGCACTACACCTGTGTGCCCTCTACAACCAGGAAGGCTGTGCTAGAGTTCTCCTATTTCGAGGAGCaaataaagaaatcaaaaacTACAACAACCAAACAGCATTTCAGGTTGCTATCATCGCAGGGAACTTTGACTTGGCAGAAATCATAAAGATCCATAAAACCTCAGATGTTGTGCCTTTCAGGGAGACCCCTTCTTATTCGTCCCGGCGGCGTGCGGTTTGTGTGTCTCCACGTCGCTCTCTGATGCGATCGGCCAGTGATAACGCTCTGGATGAGACTTTAACGGCTCCCTCTCCAGCCCCCTCCCTGCGCAGCCTGCCGCCTCTGGAGCCTGACGACACGGTCCCGTCTCAGCGGAGCCCGCAGGctgctcacacacatacacgcagcCTCAGGAGACACACACGCTCTGGAGGACACCTCAGCCCTGGCAGTCCTGTACAGAGAGAGCCGAGCCCTCCTGCGGTGCCTCGAGGGCCCAAGCGGCGGCTGTACAGTGCAGTGCCCGGGCGAACCTTCATCGCCATCAACTCCCACACTCCACAGGGCGAGGGTGAGATCACACTCAACCGAGGAGAGAGGGTCAAAGTGCTAAGCATCGGTGAAGGAGGATTCTGGGAAGGCTCAGTAAAAGGACGGACTGGCTGGTTTCCTGCTCACTGTGTAGAGGAAGTCCAGATGAGACAGTATGACCCACGACTTGAAACAAGAGAAGACCGCACCAAGAGACTATTCAGGCACTACACTGTTGGCTCCTACGACAACTATACCTCTTACAGTGATTATGTTATAGAAGAAAAAAGTGCAACGTTGCAGAAGAGAGACAGCGAAGGGTTCGGCTTTGTGCTTCGGGGAGCTAAAGCTGAGACGCCCATAGAGGAGTTCACACCTACTCCTGCTTTTCCTGCACTGCAATACTTGGAGTCAGTGGACCTGGAGGGAGTGGCGTGGAGGGCAGGATTAAGGACAGGGGATTTCCTCATAGAGGTAAATGGTGTGAGCGTAGTAAAGGTGGGACATAGGCAGGTGGTATCACTGATTCGGCAAGGTGGAAGTCGGCTAGTAATGAAGGTGGTGTCTGTTACACGCAAACCTGACACTGGAGACGTTGTTCGCAAAAAAGCCCCACCACCTCCCAAGAGAGACCCAAGCACCAGCCTGACCCTGCGCTCAAAAAGCATGACTGCAGAACTGGAGGAGCTGGCGTCAAGGAGAAGGAGGGGAGAGAAGTTGGATGAGATGTTGAGTTCGCCAAAGGAACAGGTTGTAGTGATGAGGCAGCGGCCAGTGGATTCAGACTCCAGAGCAGCCACTGTGAAACAGAGACCCACAAGTCGCCGTATCACACAGGCTGAGATCAGTTCTTTGTTAGAAAGGCAGGGTTTGCCAATAAGCGAATTATCTTTGGCTGTAGACAAAAGTCACATGCAGCTCCCTCGGGGGATGTCAAGAACCAAGTCATTTGGTAATGATGATAGAATCTCAGCCCTGATCGGAGAGCATCGCTTTCCAAGAAGTTCCTCAATGACTGACAGCTTTAGACAAGATAGCATCCCACCCCCTCCACAGACAGCTCCCCCACCACCTCCGACTCCCTATTTCCTTGATTCAGGGCCACCTCCATCCTTTCTTCCACCTCCGCCCCCTTCACGTGCTGCCAACCAGAGTCGCTCAAGCTTCCGCCCAGGAGCAGAGCCGAAAATCCATGGCCCAGTCACAACAGATCGCCAGCGAAAAACACGCTCCATGATCATTCTTCAGGACACCAGCCATTTGCCAGTGGAGCCTACCCCTATTACAAGACCGCAAACGCCTACCTCTGGACCGGTTCCTCCAGAGCGTGGTCGTAGGCGTGGACCACCTGTGGAGAATCCGTATGCTAATGTAGGTCGATTAAGTGCTGTCTATACTCCCACCAAACCTCAGCGTAGAAAGAGCCCACTAGTCAAACAAGGACCAGTCGAGGAGGGAGCTGCTGCTCATTCTAGCCGAGACCCTTCTCCATTGGGAGGTTCACGAATTCCTCACAGCAGCCGGGCGGAGCAGTTCCAACAGCAGGTTCTCTCCGAGCGAGCTAGGATCACACCTCCTGGGGCTCGACGCAGGCCTAGCGTTTTTCTGTCTGTAGAAGGGGGAGCAACAGAGCCACAGACAACTCCATTACTCTCTCAGTCTCACTCAGTGGATGAGTTGGCTGAGTTACCTCCACCTGCACCAATGCTCTCTCCTGGCCCACCACCAGGGGGGACAACTTTTATACACCCTCTAACAGGTCGACCACTCGATCCTTCATCACCTTTAGCACTTGCACTGGCTGCACGAGAACGTGCACTTAGTGGCCGAAATACACCCACCCCCACACCTTCGCCCACACCTTCGCCCACTCAAGGTAGAGCAGTGGAAAGGCCCGAGACAGAAGGAGGAGCAACACCACCTGCTCCTCTTGAGGCTCCTCCATCTAATTCCTGGAGAGATGAACCAGTCAGCATCACAGAAACGGCCAGCCAAGTGACTAGTGGTAGCCCAGGGTCTGGAAGAAGCCTTGAAGAGGCGCTCGCTCCACCCGGGGTGCAAAATATCCAACCTGCGCTGATGGATACAGAACATACCCCACCAGCAGTCCCACCCACTCTACCTTCCCCTGCCCCTACTCTTTCCAATCTGACTGCTCGAAGTATGACTATGAGCTCAGAGGAGGAAGCGGAGCCCTACACAGTGACACTTCCCCCTGCATTGCTCTCATCCAGTGATGAGGAAACCAGAGAGGAGCTTCGGAAAATAGGCCTGGTTCCACCGCCTCAACCTTTTGCTAATGGCCTTCTAATTAAAGAAACATCCAAAGCCACTCTGAGCATTTCACCTAGCGGGTCACGGCCATCCATTGCTAAGACCTCCTCTGGTAAAGCAAGTGATTCAACAGCAGACTCTGGGGTTGAAGACCCTCATATGGAGACCACCAGTACTGTTTCCACAGTCTCCAGCATGTCCACTTTGTCTTCAGAGAGCACAGACTCCGCTCATGCAAGCAAACCACGTTGTGGGGTGGGGCGTGGTCGCCCCGCCCATCTCAGGGACCCACTGCTTAAACAGTCATCAGACAGTGAGCTGCTTCCACACCCACCCAGCACAGGCCCCAGCCGTCCTCGCTACCTATTCCAAAGACGTTCCAAACTGTGGGGGGAGGAGCCCCGGGCCCAGATGGGGTCATCAGATGAAAGTCGGCCTGCTGCTATGGGGGCAGAGTTGCTTAGCAAAGACACTCATTCACTGGGTGAGGAGCCACCAATGGGAGCACCACTTGACCCTGGCAGGAGATCGCCTGTGGGAGGTGCCAGACTTTTTAGTAGTTTAGGAGAGCTTCACACCATCTCACAAAGGAGTTACGGCACCACCTTTACAATCCGACCTGGCAGCCGATACCCAGTGACCCGTAGGACTCCAAGCCCTGGAGCCACCCCAGAACGGAGTGAACCATTGGGGCCTGTCCGTACATTCGGCCCACATCACCACCATCATACAATCCTCAAGTCTTCTAGCCTAAGTTTGCCCCAGGAGCCCAAGGAGGTTCGTTTTGTCATGAGGAGTGCTAGTGCTCGAGCCCGCAGCCGCTCTCCATCCCCTTCTCCATGTGCCTCCCCCTGCCCCTCGCCGGTACTGGGAGCCCCTCTCCTGGCCCTGCGACCGTTCAGACAGCGCCCCCTAGCACTGTGGAGTAAGTATGATGTGGGAGAGTGGCTAGAGAGTGTGGGACTAGGGGAACATCGTGCACGCTTTTTAGAGCATGAGATTGAAGGAGCACACCTGCCTGCCTTGACCAAGGACGATCTGGCAGAGTTAGGGGTGACACGGGTTGGACACAGAATGAACATTGAACGTGCACTAAAGCAGTTGCTAGAAAGTTGAGGAGAGCTGAAATGCAGGATGTAGTGCcatcacaaaataattaaattgtactATTCAATTTTAAAGTTATCCCGAAGTCTAACGCCATAGATTCCAACCCACTTTGTTAGCACTGCACAGCCATTATATAATACAGATTTCTTTTTCTCCCAAGCACCCCTGATTTAACACCCACAAACAAAATCCACATTTCCTTACTAGTTTGCAG
>TCONS_00055352
ATGGAGGATCTCCACGGAAACGCAGTTGTCATCCGCATCGGAATCCCTGATCTGCAGCAAACGAAATGCCTGCGATTGGACCTTGAGGCTCCAGTGTGGGTTTGTAAGCAGCGAGTACTGGTCACTCTGACACAAAGCCTGACCGATGTGCTTAACTATGGCCTCTACCTCCCTGCCTTTAATGGGCGTGCCGGAAAGTTCCTCGATGAGGAGAGATTGCTCAGGGAGTATCCTCTCCCTACGGTCACACCTGTACCATACCTAGAGTTCCGTTACAAGAGGCGTGTTTACACTCAGAGCCATGTAGATGACAAGCAACTGGCCAAATTGCACACTAAGGCAAATTTAAAGAAGTTTATGGAGTATGTTCAGCAGAGGTGTGTGGATAAGGTCTGCCGGTTCCTGGAAAAAGGGCTGGACCCCAACTTTCATGATAGTGACAGCGGAGAATCTCCTCTCACTCTCGTGGCCCAGCTGGACACTTGTGCCGATCTGATTAAAGTGTTGAGAAGCGGAGGAGCCCATCTGGACTTCAGAACCAGAGACGGCTTGACGGCGCTGCACAAAGCGGCCCAAACGCACAACCATGTAGCATTGACTACATTGTTGGATCTGGGAGCGTCTCCGGACTATAAGGACAGTCGTGGGCTCACCCCGTTATATCACAGTGCCATGGTTGGGGGAGATCCTTACTGCTGCGAGCTGCTGCTTTATGATCACGCTCAGCTGGGCTACAGCGATGAGAACGGCTGGCAGGAGATCCATCAGGCTTGTCGTCATGGAAACGTGCAGCACCTTGAGCACCTGTTATTCTATGGAGCGGAGATGAGCGCTCAGAACGCCTCAGGAAACACAGCACTACACCTGTGTGCCCTCTACAACCAGGAAGGCTGTGCTAGAGTTCTCCTATTTCGAGGAGCaaataaagaaatcaaaaacTACAACAACCAAACAGCATTTCAGGTTGCTATCATCGCAGGGAACTTTGACTTGGCAGAAATCATAAAGATCCATAAAACCTCAGATGTTGTGCCTTTCAGGGAGACCCCTTCTTATTCGTCCCGGCGGCGTGCGGTTTGTGTGTCTCCACGTCGCTCTCTGATGCGATCGGCCAGTGATAACGCTCTGGATGAGACTTTAACGGCTCCCTCTCCAGCCCCCTCCCTGCGCAGCCTGCCGCCTCTGGAGCCTGACGACACGGTCCCGTCTCAGCGGAGCCCCCCTGGCAGTCCTGTACAGAGAGAGCCGAGCCCTCCTGCGGTGCCTCGAGGGCCCAAGCGGCGGCTGTACAGTGCAGTGCCCGGGCGAACCTTCATCGCCATCAACTCCCACACTCCACAGGGCGAGGGTGAGATCACACTCAACCGAGGAGAGAGGGTCAAAGTGCTAAGCATCGGTGAAGGAGGATTCTGGGAAGGCTCAGTAAAAGGACGGACTGGCTGGTTTCCTGCTCACTGTGTAGAGGAAGTCCAGATGAGACAGTATGACCCACGACTTGAAACAAGAGAAGACCGCACCAAGAGACTATTCAGGCACTACACTGTTGGCTCCTACGACAACTATACCTCTTACAGTGATTATGTTATAGAAGAAAAAAGTGCAACGTTGCAGAAGAGAGACAGCGAAGGGTTCGGCTTTGTGCTTCGGGGAGCTAAAGCTGAGACGCCCATAGAGGAGTTCACACCTACTCCTGCTTTTCCTGCACTGCAATACTTGGAGTCAGTGGACCTGGAGGGAGTGGCGTGGAGGGCAGGATTAAGGACAGGGGATTTCCTCATAGAGGTAAATGGTGTGAGCGTAGTAAAGGTGGGACATAGGCAGGTGGTATCACTGATTCGGCAAGGTGGAAGTCGGCTAGTAATGAAGGTGGTGTCTGTTACACGCAAACCTGACACTGGAGACGTTGTTCGCAAAAAAGCCCCACCACCTCCCAAGAGAGACCCAAGCACCAGCCTGACCCTGCGCTCAAAAAGCATGACTGCAGAACTGGAGGAGCTGGGTAAGACAGATAAGTTGGATGAGATGTTGAGTTCGCCAAAGGAACAGGTTGTACGGCCAGTGGATTCAGACTCCAGAGCAGCCACTGTGAAACAGAGACCCACAAGTCGCCGTATCACACAGGCTGAGATCAGTTCTTTGTTAGAAAGGCAGGGTTTGCCAATAAACAAAAGTCACATGCAGCTCCCTCGGGGGATGTCAAGAACCAAGTCATTTGGTGCTCCTGAGGATGATAGAATCTCAGCCCTGATCGGAGAGCATCGCTTTCCAAGAAGTTCCTCAATGACTGACAGCTTTAGACAAGATAGCATCCCACCCCCTCCACAGACAGCTCCCCCACCACCTCCGACTCCCTATTTCCTTGATTCAGGGCCACCTCCATCCTTTCTTCCACCTCCGCCCCCTTCACGTGCTGCCAACCAGAGTCGCTCAAGCTTCCGCCCAGGAGCAGAGCCGAAAATCCATGGCCCAGTCACAACAGATCGCCAGCGAAAAACACGCTCCATGATCATTCTTCAGGACACCAGCCATTTACCGCAAACGCCTACCTCTGGACCGGTTCCTCCAGAGCGTGGTCGTAGGCGTGGACCACCTGTGGAGAATCCGTATGCTAATGTAGGTCGATTAAGTGCTGTCTATACTCCCACCAAACCTCAGCGTAGAAAGAGCCCACTAGTCAAACAAGGACCAGTCGAGGAGGGAGCTGCTGCTCATTCTAGCCGAGACCCTTCTCCATTGGGAGGTTCACGAATTCCTCACAGCAGCCGGGCGGAGCAGTTCCAACAGCAGGTTCTCTCCGAGCGAGCTAGGATCACACCTCCTGGGGCTCGACGCAGGCCTAGCGTTTTTCTGTCTGTAGAAGGGGGAGCAACAGAGCCACAGACAACTCCATTACTCTCTCAGTCTCACTCAGTGGATGAGTTGGCTGAGTTACCTCCACCTGCACCAATGCTCTCTCCTGGCCCACCACCAGGGGGGACAACTTTTATACACCCTCTAACAGGTCGACCACTCGATCCTTCATCACCTTTAGCACTTGCACTGGCTGCACGAGAACGTGCACTTAGTGGCCGAAATACACCCACCCCCACACCTTCGCCCACACCTTCGCCCACTCAAGGTAGAGCAACAGAAGGAGGAGCAACACCACCTGCTCCTCTTGAGGCTCCTCCATCTAATTCCTGGAGAGATGAACCAGTCAGCATCACAGAAACGGCCAGCCAAGTGACTAGTGGTAGCCCAGGGTCTGGAAGAAAACATACCCCACCAGCAGTCCCACCCACTCTACCTTCCCCTGCCCCTACTCTTTCCAATCTGACTGCTCGAAGTATGACTATGAGCTCAGAGGAGGAAGCGGAGCCCTACACAGTGACACTTCCCCCTGCATTGCTCTCATCCAGTGATGAGGAAACCAGAGAGGAGCTTCGGAAAATAGGCCTGGTTCCACCGCCTCAACCTTTTGCTAATGGCCTTCTAATTAAAGAAACATCCAAAGCCACTCTGAGCATTTCACCTAGCGGGTCACGGCCATCCATTGCTAAGACCTCCTCTGGTAAAGCAAGTGATTCAACAGCAGACTCTGGGGTTGAAGACCCTCATATGGAGACCACCAGTACTGTTTCCACAGTCTCCAGCATGTCCACTTTGTCTTCAGAGAGCACAGACTCCGCTCATGCAAGCAAACCACGTTGTGGGGTGGGGCGTGGTCGCCCCGCCCATCTCAGGGACCCACTGCTTAAACAGTCATCAGACAGTGAGCTGCTTCCACACCCACCCAGCACAGGCCCCAGCCGTCCTCGCTACCTATTCCAAAGACGTTCCAAACTGTGGGGGGAGGAGCCCCGGGCCCAGATGGGGTCATCAGATGAAAGTCGGCCTGCTGCTATGGGGGCAGAGTTGCTTAGCAAAGACACTCATTCACTGGGTGAGGAGCCACCAATGGGAGCACCACTTGACCCTGGCAGGAGATCGCCTGTGGGAGGTGCCAGACTTTTTAGTAGTTTAGGAGAGCTTCACACCATCTCACAAAGGAGTTACGGCACCACCTTTACAATCCGACCTGGCAGCCGATACCCAGTGACCCGTAGGACTCCAAGCCCTGGAGCCACCCCAGAACGGAGTGAACCATTGGGGCCTGTCCGTACATTCGGCCCACATCACCACCATCATACAATCCTCAAGTCTTCTAGCCTAAGTTTGCCCCAGGAGCCCAAGGAGGTTCGTTTTGTCATGAGGAGTGCTAGTGCTCGAGCCCGCAGCCGCTCTCCATCCCCTTCTCCATGTGCCTCCCCCTGCCCCTCGCCGGTACTGGGAGCCCCTCTCCTGGCCCTGCGACCGTTCAGACAGCGCCCCCTAGCACTGTGGAGTAAGTATGATGTGGGAGAGTGGCTAGAGAGTGTGGGACTAGGGGAACATCGTGCACGCTTTTTAGAGCATGAGATTGAAGGAGCACACCTGCCTGCCTTGACCAAGGACGATCTGGCAGAGTTAGGGGTGACACGGGTTGGACACAGAATGAACATTGAACGTGCACTAAAGCAGTTGCTAGAAAGTTGA
>TCONS_00055351
ATGGAGGATCTCCACGGAAACGCAGTTGTCATCCGCATCGGAATCCCTGATCTGCAGCAAACGAAATGCCTGCGATTGGACCTTGAGGCTCCAGTGTGGGTTTGTAAGCAGCGAGTACTGGTCACTCTGACACAAAGCCTGACCGATGTGCTTAACTATGGCCTCTACCTCCCTGCCTTTAATGGGCGTGCCGGAAAGTTCCTCGATGAGGAGAGATTGCTCAGGGAGTATCCTCTCCCTACGGTCACACCTGTACCATACCTAGAGTTCCGTTACAAGAGGCGTGTTTACACTCAGAGCCATGTAGATGACAAGCAACTGGCCAAATTGCACACTAAGGCAAATTTAAAGAAGTTTATGGAGTATGTTCAGCAGAGGTGTGTGGATAAGGTCTGCCGGTTCCTGGAAAAAGGGCTGGACCCCAACTTTCATGATAGTGACAGCGGAGAATCTCCTCTCACTCTCGTGGCCCAGCTGGACACTTGTGCCGATCTGATTAAAGTGTTGAGAAGCGGAGGAGCCCATCTGGACTTCAGAACCAGAGACGGCTTGACGGCGCTGCACAAAGCGGCCCAAACGCACAACCATGTAGCATTGACTACATTGTTGGATCTGGGAGCGTCTCCGGACTATAAGGACAGTCGTGGGCTCACCCCGTTATATCACAGTGCCATGGTTGGGGGAGATCCTTACTGCTGCGAGCTGCTGCTTTATGATCACGCTCAGCTGGGCTACAGCGATGAGAACGGCTGGCAGGAGATCCATCAGGCTTGTCGTCATGGAAACGTGCAGCACCTTGAGCACCTGTTATTCTATGGAGCGGAGATGAGCGCTCAGAACGCCTCAGGAAACACAGCACTACACCTGTGTGCCCTCTACAACCAGGAAGGCTGTGCTAGAGTTCTCCTATTTCGAGGAGCaaataaagaaatcaaaaacTACAACAACCAAACAGCATTTCAGGTTGCTATCATCGCAGGGAACTTTGACTTGGCAGAAATCATAAAGATCCATAAAACCTCAGATGTTGTGCCTTTCAGGGAGACCCCTTCTTATTCGTCCCGGCGGCGTGCGGTTTGTGTGTCTCCACGTCGCTCTCTGATGCGATCGGCCAGTGATAACGCTCTGGATGAGACTTTAACGGCTCCCTCTCCAGCCCCCTCCCTGCGCAGCCTGCCGCCTCTGGAGCCTGACGACACGGTCCCGTCTCAGCGGAGCCCCCCTGGCAGTCCTGTACAGAGAGAGCCGAGCCCTCCTGCGGTGCCTCGAGGGCCCAAGCGGCGGCTGTACAGTGCAGTGCCCGGGCGAACCTTCATCGCCATCAACTCCCACACTCCACAGGGCGAGGGTGAGATCACACTCAACCGAGGAGAGAGGGTCAAAGTGCTAAGCATCGGTGAAGGAGGATTCTGGGAAGGCTCAGTAAAAGGACGGACTGGCTGGTTTCCTGCTCACTGTGTAGAGGAAGTCCAGATGAGACAGTATGACCCACGACTTGAAACAAGAGAAGACCGCACCAAGAGACTATTCAGGCACTACACTGTTGGCTCCTACGACAACTATACCTCTTACAGTGATTATGTTATAGAAGAAAAAAGTGCAACGTTGCAGAAGAGAGACAGCGAAGGGTTCGGCTTTGTGCTTCGGGGAGCTAAAGCTGAGACGCCCATAGAGGAGTTCACACCTACTCCTGCTTTTCCTGCACTGCAATACTTGGAGTCAGTGGACCTGGAGGGAGTGGCGTGGAGGGCAGGATTAAGGACAGGGGATTTCCTCATAGAGGTAAATGGTGTGAGCGTAGTAAAGGTGGGACATAGGCAGGTGGTATCACTGATTCGGCAAGGTGGAAGTCGGCTAGTAATGAAGGTGGTGTCTGTTACACGCAAACCTGACACTGGAGACGTTGTTCGCAAAAAAGCCCCACCACCTCCCAAGAGAGACCCAAGCACCAGCCTGACCCTGCGCTCAAAAAGCATGACTGCAGAACTGGAGGAGCTGGGTAAGACAGATAAGTTGGATGAGATGTTGAGTTCGCCAAAGGAACAGGTTGTACGGCCAGTGGATTCAGACTCCAGAGCAGCCACTGTGAAACAGAGACCCACAAGTCGCCGTATCACACAGGCTGAGATCAGTTCTTTGTTAGAAAGGCAGGGTTTGCCAATAAACAAAAGTCACATGCAGCTCCCTCGGGGGATGTCAAGAACCAAGTCATTTGGTGCTCCTGAGGATGATAGAATCTCAGCCCTGATCGGAGAGCATCGCTTTCCAAGAAGTTCCTCAATGACTGACAGCTTTAGACAAGATAGCATCCCACCCCCTCCACAGACAGCTCCCCCACCACCTCCGACTCCCTATTTCCTTGATTCAGGGCCACCTCCATCCTTTCTTCCACCTCCGCCCCCTTCACGTGCTGCCAACCAGAGTCGCTCAAGCTTCCGCCCAGGAGCAGAGCCGAAAATCCATGGCCCAGTCACAACAGATCGCCAGCGAAAAACACGCTCCATGATCATTCTTCAGGACACCAGCCATTTACCGCAAACGCCTACCTCTGGACCGGTTCCTCCAGAGCGTGGTCGTAGGCGTGGACCACCTGTGGAGAATCCGTATGCTAATGTAGGTCGATTAAGTGCTGTCTATACTCCCACCAAACCTCAGCGTAGAAAGAGCCCACTAGTCAAACAAGGACCAGTCGAGGAGGGAGCTGCTGCTCATTCTAGCCGAGACCCTTCTCCATTGGGAGGTTCACGAATTCCTCACAGCAGCCGGGCGGAGCAGTTCCAACAGCAGGTTCTCTCCGAGCGAGCTAGGATCACACCTCCTGGGGCTCGACGCAGGCCTAGCGTTTTTCTGTCTGTAGAAGGGGGAGCAACAGAGCCACAGACAACTCCATTACTCTCTCAGTCTCACTCAGTGGATGAGTTGGCTGAGTTACCTCCACCTGCACCAATGCTCTCTCCTGGCCCACCACCAGGGGGGACAACTTTTATACACCCTCTAACAGGTCGACCACTCGATCCTTCATCACCTTTAGCACTTGCACTGGCTGCACGAGAACGTGCACTTAGTGGCCGAAATACACCCACCCCCACACCTTCGCCCACACCTTCGCCCACTCAAGGTAGAGCAGTGGAAAGGCCCGAGACAGAAGGAGGAGCAACACCACCTGCTCCTCTTGAGGCTCCTCCATCTAATTCCTGGAGAGATGAACCAGTCAGCATCACAGAAACGGCCAGCCAAGTGACTAGTGGTAGCCCAGGGTCTGGAAGAAGCCTTGAAGAGGCGCTCGCTCCACCCGGGGTGCAAAATATCCAACCTGCGCTGATGGATACAGAACATACCCCACCAGCAGTCCCACCCACTCTACCTTCCCCTGCCCCTACTCTTTCCAATCTGACTGCTCGAAGTATGACTATGAGCTCAGAGGAGGAAGCGGAGCCCTACACAGTGACACTTCCCCCTGCATTGCTCTCATCCAGTGATGAGGAAACCAGAGAGGAGCTTCGGAAAATAGGCCTGGTTCCACCGCCTCAACCTTTTGCTAATGAAACATCCAAAGCCACTCTGAGCATTTCACCTAGCGGGTCACGGCCATCCATTGCTAAGACCTCCTCTGGTAAAGCAAGTGATTCAACAGCAGACTCTGGGGTTGAAGACCCTCATATGGAGACCACCAGTACTGTTTCCACAGTCTCCAGCATGTCCACTTTGTCTTCAGAGAGCACAGACTCCGCTCATGCAAGCAAACCACGTTGTGGGGTGGGGCGTGGTCGCCCCGCCCATCTCAGGGACCCACTGCTTAAACAGTCATCAGACAGTGAGCTGCTTCCACACCCACCCAGCACAGGCCCCAGCCGTCCTCGCTACCTATTCCAAAGACGTTCCAAACTGTGGGGGGAGGAGCCCCGGGCCCAGATGGGGTCATCAGATGAAAGTCGGCCTGCTGCTATGGGGGCAGAGTTGCTTAGCAAAGACACTCATTCACTGGGTGAGGAGCCACCAATGGGAGCACCACTTGACCCTGGCAGGAGATCGCCTGTGGGAGGTGCCAGACTTTTTAGTAGTTTAGGAGAGCTTCACACCATCTCACAAAGGAGTTACGGCACCACCTTTACAATCCGACCTGGCAGCCGATACCCAGTGACCCGTAGGACTCCAAGCCCTGGAGCCACCCCAGAACGGAGTGAACCATTGGGGCCTGTCCGTACATTCGGCCCACATCACCACCATCATACAATCCTCAAGTCTTCTAGCCTAAGTTTGCCCCAGGAGCCCAAGGAGGTTCGTTTTGTCATGAGGAGTGCTAGTGCTCGAGCCCGCAGCCGCTCTCCATCCCCTTCTCCATGTGCCTCCCCCTGCCCCTCGCCGGTACTGGGAGCCCCTCTCCTGGCCCTGCGACCGTTCAGACAGCGCCCCCTAGCACTGTGGAGTAAGTATGATGTGGGAGAGTGGCTAGAGAGTGTGGGACTAGGGGAACATCGTGCACGCTTTTTAGAGCATGAGATTGAAGGAGCACACCTGCCTGCCTTGACCAAGGACGATCTGGCAGAGTTAGGGGTGACACGGGTTGGACACAGAATGAACATTGAACGTGCACTAAAGCAGTTGCTAGAAAGTTGA
>TCONS_00055353
ATGCCTATCAGTCCACCTGCCGACGGCAAACATGAGGCTCTCGACCGGCCGTGGCAACAACACGCCCCTACCAACGGTAACCACGGAGATGACAGTATTCGGACCTCTCCTGGGAGTAAATGTGGCTCCGAACCTATGGAGGATCTCCACGGAAACGCAGTTGTCATCCGCATCGGAATCCCTGATCTGCAGCAAACGAAATGCCTGCGATTGGACCTTGAGGCTCCAGTGTGGGTTTGTAAGCAGCGAGTACTGGTCACTCTGACACAAAGCCTGACCGATGTGCTTAACTATGGCCTCTACCTCCCTGCCTTTAATGGGCGTGCCGGAAAGTTCCTCGATGAGGAGAGATTGCTCAGGGAGTATCCTCTCCCTACGGTCACACCTGTACCATACCTAGAGTTCCGTTACAAGAGGCGTGTTTACACTCAGAGCCATGTAGATGACAAGCAACTGGCCAAATTGCACACTAAGGCAAATTTAAAGAAGTTTATGGAGTATGTTCAGCAGAGGTGTGTGGATAAGGTCTGCCGGTTCCTGGAAAAAGGGCTGGACCCCAACTTTCATGATAGTGACAGCGGAGAATCTCCTCTCACTCTCGTGGCCCAGCTGGACACTTGTGCCGATCTGATTAAAGTGTTGAGAAGCGGAGGAGCCCATCTGGACTTCAGAACCAGAGACGGCTTGACGGCGCTGCACAAAGCGGCCCAAACGCACAACCATGTAGCATTGACTACATTGTTGGATCTGGGAGCGTCTCCGGACTATAAGGACAGTCGTGGGCTCACCCCGTTATATCACAGTGCCATGGTTGGGGGAGATCCTTACTGCTGCGAGCTGCTGCTTTATGATCACGCTCAGCTGGGCTACAGCGATGAGAACGGCTGGCAGGAGATCCATCAGGCTTGTCGTCATGGAAACGTGCAGCACCTTGAGCACCTGTTATTCTATGGAGCGGAGATGAGCGCTCAGAACGCCTCAGGAAACACAGCACTACACCTGTGTGCCCTCTACAACCAGGAAGGCTGTGCTAGAGTTCTCCTATTTCGAGGAGCaaataaagaaatcaaaaacTACAACAACCAAACAGCATTTCAGGTTGCTATCATCGCAGGGAACTTTGACTTGGCAGAAATCATAAAGATCCATAAAACCTCAGATGTTGTGCCTTTCAGGGAGACCCCTTCTTATTCGTCCCGGCGGCGTGCGGTTTGTGTGTCTCCACGTCGCTCTCTGATGCGATCGGCCAGTGATAACGCTCTGGATGAGACTTTAACGGCTCCCTCTCCAGCCCCCTCCCTGCGCAGCCTGCCGCCTCTGGAGCCTGACGACACGGTCCCGTCTCAACACACACGCTCTGGAGGACACCTCAGCCCTGGCAGTCCTGTACAGAGAGAGCCGAGCCCTCCTGCGGTGCCTCGAGGGCCCAAGCGGCGGCTGTACAGTGCAGTGCCCGGGCGAACCTTCATCGCCATCAACTCCCACACTCCACAGGGCGAGGGTGAGATCACACTCAACCGAGGAGAGAGGGTCAAAGTGCTAAGCATCGGTGAAGGAGGATTCTGGGAAGGCTCAGTAAAAGGACGGACTGGCTGGTTTCCTGCTCACTGTGTAGAGGAAGTCCAGATGAGACAGTATGACCCACGACTTGAAACAAGAGAAGACCGCACCAAGAGACTATTCAGGCACTACACTGTTGGCTCCTACGACAACTATACCTCTTACAGTGATTATGTTATAGAAGAAAAAAGTGCAACGTTGCAGAAGAGAGACAGCGAAGGGTTCGGCTTTGTGCTTCGGGGAGCTAAAGCTGAGACGCCCATAGAGGAGTTCACACCTACTCCTGCTTTTCCTGCACTGCAATACTTGGAGTCAGTGGACCTGGAGGGAGTGGCGTGGAGGGCAGGATTAAGGACAGGGGATTTCCTCATAGAGGTAAATGGTGTGAGCGTAGTAAAGGTGGGACATAGGCAGGTGGTATCACTGATTCGGCAAGGTGGAAGTCGGCTAGTAATGAAGGTGGTGTCTGTTACACGCAAACCTGACACTGGAGACGTTGTTCGCAAAAAAGCCCCACCACCTCCCAAGAGAGACCCAAGCACCAGCCTGACCCTGCGCTCAAAAAGCATGACTGCAGAACTGGAGGAGCTGGGTAAGACAGATAAGTTGGATGAGATGTTGAGTTCGCCAAAGGAACAGGTTGTACGGCCAGTGGATTCAGACTCCAGAGCAGCCACTGTGAAACAGAGACCCACAAGTCGCCGTATCACACAGGCTGAGATCAGTTCTTTGTTAGAAAGGCAGGGTTTGCCAATAAACAAAAGTCACATGCAGCTCCCTCGGGGGATGTCAAGAACCAAGTCATTTGGTGCTCCTGAGGATGATAGAATCTCAGCCCTGATCGGAGAGCATCGCTTTCCAAGAAGTTCCTCAATGACTGACAGCTTTAGACAAGATAGCATCCCACCCCCTCCACAGACAGCTCCCCCACCACCTCCGACTCCCTATTTCCTTGATTCAGGGCCACCTCCATCCTTTCTTCCACCTCCGCCCCCTTCACGTGCTGCCAACCAGAGTCGCTCAAGCTTCCGCCCAGGAGCAGAGCCGAAAATCCATGGCCCAGTCACAACAGATCGCCAGCGAAAAACACGCTCCATGATCATTCTTCAGGACACCAGCCATTTGCCAGTGGAGCCTACCCCTATTACAAGACCGCAAACGCCTACCTCTGGACCGGTTCCTCCAGAGCGTGGTCGTAGGCGTGGACCACCTGTGGAGAATCCGTATGCTAATGTAGGTCGATTAAGTGCTGTCTATACTCCCACCAAACCTCAGCGTAGAAAGAGCCCACTAGTCAAACAAGGACCAGTCGAGGAGGGAGCTGCTGCTCATTCTAGCCGAGACCCTTCTCCATTGGGAGGTTCACGAATTCCTCACAGCAGCCGGGCGGAGCAGTTCCAACAGCAGGTTCTCTCCGAGCGAGCTAGGATCACACCTCCTGGGGCTCGACGCAGGCCTAGCGTTTTTCTGTCTGTAGAAGGGGGAGCAACAGAGCCACAGACAACTCCATTACTCTCTCAGTCTCACTCAGTGGATGAGTTGGCTGAGTTACCTCCACCTGCACCAATGCTCTCTCCTGGCCCACCACCAGGGGGGACAACTTTTATACACCCTCTAACAGGTCGACCACTCGATCCTTCATCACCTTTAGCACTTGCACTGGCTGCACGAGAACGTGCACTTAGTGGCCGAAATACACCCACCCCCACACCTTCGCCCACACCTTCGCCCACTCAAGGTAGAGCAGTGGAAAGGCCCGAGACAGAAGGAGGAGCAACACCACCTGCTCCTCTTGAGGCTCCTCCATCTAATTCCTGGAGAGATGAACCAGTCAGCATCACAGAAACGGCCAGCCAAGTGACTAGTGGTAGCCCAGGGTCTGGAAGAAGCCTTGAAGAGGCGCTCGCTCCACCCGGGGTGCAAAATATCCAACCTGCGCTGATGGATACAGAACATACCCCACCAGCAGTCCCACCCACTCTACCTTCCCCTGCCCCTACTCTTTCCAATCTGACTGCTCGAAGTATGACTATGAGCTCAGAGGAGGAAGCGGAGCCCTACACAGTGACACTTCCCCCTGCATTGCTCTCATCCAGTGATGAGGAAACCAGAGAGGAGCTTCGGAAAATAGGCCTGGTTCCACCGCCTCAACCTTTTGCTAATGGCCTTCTAATTAAAGAAACATCCAAAGCCACTCTGAGCATTTCACCTAGCGGGTCACGGCCATCCATTGCTAAGACCTCCTCTGGTAAAGCAAGTGATTCAACAGCAGACTCTGGGGTTGAAGACCCTCATATGGAGACCACCAGTACTGTTTCCACAGTCTCCAGCATGTCCACTTTGTCTTCAGAGAGCACAGACTCCGCTCATGCAAGCAAACCACGTTGTGGGGTGGGGCGTGGTCGCCCCGCCCATCTCAGGGACCCACTGCTTAAACAGTCATCAGACAGTGAGCTGCTTCCACACCCACCCAGCACAGGCCCCAGCCGTCCTCGCTACCTATTCCAAAGACGTTCCAAACTGTGGGGGGAGGAGCCCCGGGCCCAGATGGGGTCATCAGATGAAAGTCGGCCTGCTGCTATGGGGGCAGAGTTGCTTAGCAAAGACACTCATTCACTGGGTGAGGAGCCACCAATGGGAGCACCACTTGACCCTGGCAGGAGATCGCCTGTGGGAGGTGCCAGACTTTTTAGTAGTTTAGGAGAGCTTCACACCATCTCACAAAGGAGTTACGGCACCACCTTTACAATCCGACCTGGCAGCCGATACCCAGTGACCCGTAGGACTCCAAGCCCTGGAGCCACCCCAGAACGGAGTGAACCATTGGGGCCTGTCCGTACATTCGGCCCACATCACCACCATCATACAATCCTCAAGTCTTCTAGCCTAAGTTTGCCCCAGGAGCCCAAGGAGGTTCGTTTTGTCATGAGGAGTGCTAGTGCTCGAGCCCGCAGCCGCTCTCCATCCCCTTCTCCATGTGCCTCCCCCTGCCCCTCGCCGGTACTGGGAGCCCCTCTCCTGGCCCTGCGACCGTTCAGACAGCGCCCCCTAGCACTGTGGAGTAAGTATGATGTGGGAGAGTGGCTAGAGAGTGTGGGACTAGGGGAACATCGTGCACGCTTTTTAGAGCATGAGATTGAAGGAGCACACCTGCCTGCCTTGACCAAGGACGATCTGGCAGAGTTAGGGGTGACACGGGTTGGACACAGAATGAACATTGAACGTGCACTAAAGCAGTTGCTAGAAAGTTGA
>TCONS_00055354
CGCCCATCTCAGGGACCCACTGCTTAAACAGTCATCAGACAGTGAGCTGCTTCCACACCCACCCAGCACAGGCCCCAGCCGTCCTCGCTACCTATTCCAAAGACGTTCCAAACTGTGGGGGGAGGAGCCCCGGGCCCAGATGGGGTCATCAGATGAAAGTCGGCCTGCTGCTATGGGGGCAGAGTTGCTTAGCAAAGACACTCATTCACTGGGTGAGGAGCCACCAATGGGAGCACCACTTGACCCTGGCAGGAGATCGCCTGTGGGAGGTGCCAGATGTGAGGAGAATGGAGGAGAGAGTAAATCGTAGGTTTTTAGCTCTACTTTTTAGTAGTTTAGGAGAGCTTCACACCATCTCACAAAGGAGTTACGGCACCACCTTTACAATCCGACCTGGCAGCCGATACCCAGTGACCCGTAGGACTCCAAGCCCTGGAGCCACCCCAGAACGGAGTGAACCATTGGGGCCTGTCCGTACATTCGGCCCACATCACCACCATCATACAATCCTCAAGTCTTCTAGCCTAAGTTTGCCCCAGGAGCCCAAGGAGGTTCGTTTTGTCATGAGGAGTGCTAGTGCTCGAGCCCGCAGCCGCTCTCCATCCCCTTCTCCATGTGCCTCCCCCTGCCCCTCGCC

Function

symbol description
shank3b Predicted to enable ionotropic glutamate receptor binding activity and synaptic receptor adaptor activity. Acts upstream of or within intestinal motility. Predicted to be located in cytoplasm and synapse. Predicted to be active in dendritic spine and postsynaptic density. Predicted to colocalize with postsynaptic membrane. Is expressed in brain; forebrain; and midbrain. Used to study autism spectrum disorder. Human ortholog(s) of this gene implicated in Phelan-McDermid syndrome and schizophrenia 15. Orthologous to human SHANK3 (SH3 and multiple ankyrin repeat domains 3).

GO:

id name namespace
GO:0051124 synaptic growth at neuromuscular junction biological_process
GO:0051968 positive regulation of synaptic transmission, glutamatergic biological_process
GO:2000463 positive regulation of excitatory postsynaptic potential biological_process
GO:0097107 postsynaptic density assembly biological_process
GO:0120054 intestinal motility biological_process
GO:0048854 brain morphogenesis biological_process
GO:0007610 behavior biological_process
GO:0060997 dendritic spine morphogenesis biological_process
GO:0060999 positive regulation of dendritic spine development biological_process
GO:2000311 regulation of AMPA receptor activity biological_process
GO:0007416 synapse assembly biological_process
GO:0060291 long-term synaptic potentiation biological_process
GO:0043005 neuron projection cellular_component
GO:0030425 dendrite cellular_component
GO:0045211 postsynaptic membrane cellular_component
GO:0044309 neuron spine cellular_component
GO:0008328 ionotropic glutamate receptor complex cellular_component
GO:0014069 postsynaptic density cellular_component
GO:0043197 dendritic spine cellular_component
GO:0035255 ionotropic glutamate receptor binding molecular_function
GO:0030159 signaling receptor complex adaptor activity molecular_function
GO:0030160 synaptic receptor adaptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-041210-74 Predicted to enable ionotropic glutamate receptor binding activity and synaptic receptor adaptor activity. Acts upstream of or within intestinal motility. Predicted to be located in cytoplasm and synapse. Predicted to be active in dendritic spine and postsynaptic density. Predicted to colocalize with postsynaptic membrane. Is expressed in brain; forebrain; and midbrain. Used to study autism spectrum disorder. Human ortholog(s) of this gene implicated in Phelan-McDermid syndrome and schizophrenia 15. Orthologous to human SHANK3 (SH3 and multiple ankyrin repeat domains 3).

Ensembl:

ensembl_id ENSDARG00000063054

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055350 False 5490 mRNA 0.53 23 9555280 9586713
TCONS_00055352 False 4554 mRNA 0.54 26 9555488 9579299
TCONS_00055351 False 4617 mRNA 0.54 25 9555488 9579299
TCONS_00055353 False 4812 mRNA 0.54 24 9555488 9579434
TCONS_00055354 True 637 mRNA 0.57 3 9555741 9557186

Neighbor

gene id symbol gene type direction distance location
XLOC_028536 tymp coding downstream 5587 9543459 ~ 9549693 (-)
XLOC_028535 si:ch73-139j3.4 coding downstream 21935 9524805 ~ 9533345 (-)
XLOC_028534 NA coding downstream 33338 9514548 ~ 9521942 (-)
XLOC_028533 NA coding downstream 165632 9388818 ~ 9389648 (-)
XLOC_028532 C4H12orf66 coding downstream 204695 9339067 ~ 9350585 (-)
XLOC_028538 cdnf coding upstream 1255 9587968 ~ 9592402 (-)
XLOC_028539 dclre1c coding upstream 16593 9603306 ~ 9637398 (-)
XLOC_028540 BX901962.1 coding upstream 62570 9649283 ~ 9651968 (-)
XLOC_028541 dmtf1 coding upstream 65503 9652216 ~ 9667410 (-)
XLOC_028542 tspan9b coding upstream 110252 9696965 ~ 9722568 (-)
XLOC_028527 NA non-coding downstream 504335 9048306 ~ 9050945 (-)
XLOC_028525 NA non-coding downstream 649827 8904291 ~ 8905453 (-)
XLOC_028521 BX842699.1 non-coding downstream 819689 8709082 ~ 8735591 (-)
XLOC_028551 NA non-coding upstream 760025 10346738 ~ 10348612 (-)
XLOC_028553 BX897748.1 non-coding upstream 1074848 10661561 ~ 10661677 (-)
XLOC_028554 NA non-coding upstream 1162264 10748977 ~ 10752941 (-)
XLOC_028555 NA non-coding upstream 1179301 10766014 ~ 10835620 (-)

Expression


Co-expression Network