G936477


Basic Information

Item Value
gene id G936477
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4384390 ~ 4385052 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068002
gggttggtttgggttgGTGAATTGAGTCTCAGAACCAggtggctgagtgttgtcctgaggctctatggggttggtttgggttggtgaattGAGTCTCAGAACCAGgtggctgagtgttgtcctgaggctctatggggttgttTTGGGTTGGTGAattgagcctcagaaccagctggctgaggggactcttctcttgtttcatctcttgacattgtagagctgtgtgatggaatgttttgaggtcacttgtttttagatggttgt
>TU1068003
gggttggtttgggttgGTGAATTGAGTCTCAGAACCAgctggctgagtgctgtcctgaggctctatggggttggtttgggttggtgaattGAGTCTCAGAACCAGgtggctgagtgttgtcctgaggctctatggggttggtttgggttagtgaactgagcctcagaaccaggtggctgagtgttgtcctgaggctctatggggttggtttgggttggtgaattGAGTCTCAGAACCAGgtggctgagtgttgtcctgaggctctatggggttgttTTGGGTTGGTGAattgagcctcagaaccagctggctgaggggactcttctcttgtttcatctcttgacattgtagagctgtgtgatggaatgttttgaggtcacttgtttttagatggttgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068002 False 264 lncRNA 0.48 3 4384390 4385052
TU1068003 True 398 lncRNA 0.50 4 4384390 4385052

Neighbor

gene id symbol gene type direction distance location
LOC118937460 NA coding upstream 266987 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 360698 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 363058 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 363815 4020480 ~ 4020575 (+)
LOC118937477 NA coding upstream 364482 4019814 ~ 4019908 (+)
LOC110536527 trpa1 coding downstream 106716 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 198564 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 434693 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 573992 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 783835 5168887 ~ 5184807 (+)
G936459 NA non-coding upstream 40243 4342903 ~ 4344147 (+)
G936452 NA non-coding upstream 52602 4331465 ~ 4331788 (+)
G936449 NA non-coding upstream 60158 4319579 ~ 4324232 (+)
G936444 NA non-coding upstream 79588 4304588 ~ 4304802 (+)
G936440 NA non-coding upstream 103925 4280246 ~ 4280465 (+)
G936613 NA non-coding downstream 17594 4402646 ~ 4404224 (+)
G936614 NA non-coding downstream 19351 4404403 ~ 4405069 (+)
G936618 NA non-coding downstream 21528 4406580 ~ 4406825 (+)
G936619 NA non-coding downstream 22020 4407072 ~ 4407361 (+)
G936626 NA non-coding downstream 30909 4415961 ~ 4416164 (+)
G935977 NA other upstream 402192 3981851 ~ 3982198 (+)
G935976 NA other upstream 403239 3980771 ~ 3981151 (+)
G935846 NA other upstream 833903 3550039 ~ 3550487 (+)
G934640 NA other upstream 2475310 1908660 ~ 1909080 (+)
G934579 NA other upstream 2557024 1826627 ~ 1827366 (+)
G937051 NA other downstream 634853 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 758265 5143317 ~ 5144565 (+)
G937237 NA other downstream 1119652 5504704 ~ 5505329 (+)
G937889 NA other downstream 1736532 6121584 ~ 6122269 (+)
G938723 NA other downstream 2634099 7019151 ~ 7021424 (+)

Expression


Co-expression Network