G936643


Basic Information

Item Value
gene id G936643
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4448247 ~ 4448776 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068226
ctttaattaactgtccaaccagagcctttaattaactgtccaaccagagcctttaattaactgtccaaccagaccctttaattaactgtccaaccagaccctttaattaactgtccaaccagaccctttaattaactgtccaaccagaccctttaattaactgtccaaccagaccctttaattaactgtccaaccagaccctttaattaactgtccaaccagagcctttaattaactgtccaaccagaccatttaattaactgtccaacctgagcatttaattaactgtccaaccagagcctttaattaactgtccaaccagaccctttaattaactgtccaaccagagcctttaattaactgtccaaccagaccctttaattaactgtccaaacactgcctttaattaactgtccaaccagaccctttaattaactgtccaaccagaccctttaattaactgtccaaccagagcctttaattaactgtccaaccagaccatttaattaactgtccaaccagacccttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068226 True 530 lncRNA 0.39 1 4448247 4448776

Neighbor

gene id symbol gene type direction distance location
LOC118937460 NA coding upstream 330844 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 424555 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 426915 4021240 ~ 4021332 (+)
LOC118937478 NA coding upstream 427672 4020480 ~ 4020575 (+)
LOC118937477 NA coding upstream 428339 4019814 ~ 4019908 (+)
LOC110536527 trpa1 coding downstream 42992 4491768 ~ 4568591 (+)
LOC118937435 msc coding downstream 134840 4583616 ~ 4586582 (+)
eya1 LOC106590661 coding downstream 370969 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 510268 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 720111 5168887 ~ 5184807 (+)
G936636 NA non-coding upstream 3217 4444809 ~ 4445030 (+)
G936626 NA non-coding upstream 32083 4415961 ~ 4416164 (+)
G936619 NA non-coding upstream 40886 4407072 ~ 4407361 (+)
G936618 NA non-coding upstream 41422 4406580 ~ 4406825 (+)
G936614 NA non-coding upstream 43178 4404403 ~ 4405069 (+)
G936644 NA non-coding downstream 520 4449296 ~ 4449582 (+)
G936645 NA non-coding downstream 2967 4451743 ~ 4451961 (+)
G936649 NA non-coding downstream 10180 4458956 ~ 4533646 (+)
G936664 NA non-coding downstream 29414 4478190 ~ 4478461 (+)
G936703 NA non-coding downstream 127398 4576174 ~ 4576970 (+)
G935977 NA other upstream 466049 3981851 ~ 3982198 (+)
G935976 NA other upstream 467096 3980771 ~ 3981151 (+)
G935846 NA other upstream 897760 3550039 ~ 3550487 (+)
G934640 NA other upstream 2539167 1908660 ~ 1909080 (+)
G934579 NA other upstream 2620881 1826627 ~ 1827366 (+)
G937051 NA other downstream 571129 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 694541 5143317 ~ 5144565 (+)
G937237 NA other downstream 1055928 5504704 ~ 5505329 (+)
G937889 NA other downstream 1672808 6121584 ~ 6122269 (+)
G938723 NA other downstream 2570375 7019151 ~ 7021424 (+)

Expression


Co-expression Network