G936786


Basic Information

Item Value
gene id G936786
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4648843 ~ 4649049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068404
GACCGTGGACtaaaggagaaggaagggagtagagggagtagaccgtggactaaaggagaaggaagggagtagagagagcagaccgtggactaaaggagaaggaagggagtagagagagtagaccgTGGACTAAAGGAGAAGGGAATAGAGGGAGTAGACCGTGGACtaaaggagaaggaagggagtagagggagtagaccgtggact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068404 True 207 lncRNA 0.52 1 4648843 4649049

Neighbor

gene id symbol gene type direction distance location
LOC118937435 msc coding upstream 62261 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 80252 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 531440 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 625151 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 627511 4021240 ~ 4021332 (+)
eya1 LOC106590661 coding downstream 170696 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 309995 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 519838 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 544132 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 783277 5432326 ~ 5439359 (+)
G936703 NA non-coding upstream 71873 4576174 ~ 4576970 (+)
G936649 NA non-coding upstream 115197 4458956 ~ 4533646 (+)
G936664 NA non-coding upstream 170382 4478190 ~ 4478461 (+)
G936645 NA non-coding upstream 196882 4451743 ~ 4451961 (+)
G936644 NA non-coding upstream 199261 4449296 ~ 4449582 (+)
G936787 NA non-coding downstream 1119 4650168 ~ 4650382 (+)
G936795 NA non-coding downstream 15585 4664634 ~ 4665777 (+)
G936805 NA non-coding downstream 46447 4695496 ~ 4696588 (+)
G936812 NA non-coding downstream 52440 4701489 ~ 4702345 (+)
G936816 NA non-coding downstream 57308 4706357 ~ 4706606 (+)
G935977 NA other upstream 666645 3981851 ~ 3982198 (+)
G935976 NA other upstream 667692 3980771 ~ 3981151 (+)
G935846 NA other upstream 1098356 3550039 ~ 3550487 (+)
G934640 NA other upstream 2739763 1908660 ~ 1909080 (+)
G934579 NA other upstream 2821477 1826627 ~ 1827366 (+)
G937051 NA other downstream 370856 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 494268 5143317 ~ 5144565 (+)
G937237 NA other downstream 855655 5504704 ~ 5505329 (+)
G937889 NA other downstream 1472535 6121584 ~ 6122269 (+)
G938723 NA other downstream 2370102 7019151 ~ 7021424 (+)

Expression


Co-expression Network