G936787


Basic Information

Item Value
gene id G936787
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4650168 ~ 4650382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068405
gggagtagagagagtagaccgtggactaaaggagaaggaagggagtagagggagtagaccATGGACTGAAGGAGACGgaagggagtagagggagtagaatatggactaaaggagaaggaagggagtagagagagtagaccgtggactaaaggagaaggaagggagtagagggagtagaccATGGACTGAAGGAGACGgaagggagtagagggagt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068405 True 215 lncRNA 0.52 1 4650168 4650382

Neighbor

gene id symbol gene type direction distance location
LOC118937435 msc coding upstream 63586 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 81577 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 532765 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 626476 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 628836 4021240 ~ 4021332 (+)
eya1 LOC106590661 coding downstream 169363 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 308662 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 518505 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 542799 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 781944 5432326 ~ 5439359 (+)
G936786 NA non-coding upstream 1119 4648843 ~ 4649049 (+)
G936703 NA non-coding upstream 73198 4576174 ~ 4576970 (+)
G936649 NA non-coding upstream 116522 4458956 ~ 4533646 (+)
G936664 NA non-coding upstream 171707 4478190 ~ 4478461 (+)
G936645 NA non-coding upstream 198207 4451743 ~ 4451961 (+)
G936795 NA non-coding downstream 14252 4664634 ~ 4665777 (+)
G936805 NA non-coding downstream 45114 4695496 ~ 4696588 (+)
G936812 NA non-coding downstream 51107 4701489 ~ 4702345 (+)
G936816 NA non-coding downstream 55975 4706357 ~ 4706606 (+)
G936821 NA non-coding downstream 59445 4709827 ~ 4710063 (+)
G935977 NA other upstream 667970 3981851 ~ 3982198 (+)
G935976 NA other upstream 669017 3980771 ~ 3981151 (+)
G935846 NA other upstream 1099681 3550039 ~ 3550487 (+)
G934640 NA other upstream 2741088 1908660 ~ 1909080 (+)
G934579 NA other upstream 2822802 1826627 ~ 1827366 (+)
G937051 NA other downstream 369523 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 492935 5143317 ~ 5144565 (+)
G937237 NA other downstream 854322 5504704 ~ 5505329 (+)
G937889 NA other downstream 1471202 6121584 ~ 6122269 (+)
G938723 NA other downstream 2368769 7019151 ~ 7021424 (+)

Expression


Co-expression Network