G936805


Basic Information

Item Value
gene id G936805
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4695496 ~ 4696588 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068426
ACCTCCTGATTACAGTATTACCCCCTGATTACAGTATTACCCCCTGATTACAGTATTACCTCCTGATTACAGTATTACCCCCTGATTACAGTATTACCTCCTGATTACAGTATTACCCCCTGATTACAGTATTACCCCCTGATTACAGTATTACCCCCTGATTACAGTATTACCTCCTGATTACAGTATTAACCCCTGATTACAGTATTACCCCCTGATTACAGTATTACCTCCTGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068426 True 239 lncRNA 0.40 2 4695496 4696588

Neighbor

gene id symbol gene type direction distance location
LOC118937435 msc coding upstream 108914 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 126905 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 578093 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 671804 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 674164 4021240 ~ 4021332 (+)
eya1 LOC106590661 coding downstream 123157 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 262456 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 472299 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 496593 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 735738 5432326 ~ 5439359 (+)
G936795 NA non-coding upstream 29719 4664634 ~ 4665777 (+)
G936787 NA non-coding upstream 45114 4650168 ~ 4650382 (+)
G936786 NA non-coding upstream 46447 4648843 ~ 4649049 (+)
G936703 NA non-coding upstream 118526 4576174 ~ 4576970 (+)
G936649 NA non-coding upstream 161850 4458956 ~ 4533646 (+)
G936812 NA non-coding downstream 4901 4701489 ~ 4702345 (+)
G936816 NA non-coding downstream 9769 4706357 ~ 4706606 (+)
G936821 NA non-coding downstream 13239 4709827 ~ 4710063 (+)
G936839 NA non-coding downstream 37007 4733595 ~ 4734231 (+)
G936841 NA non-coding downstream 38630 4735218 ~ 4735428 (+)
G935977 NA other upstream 713298 3981851 ~ 3982198 (+)
G935976 NA other upstream 714345 3980771 ~ 3981151 (+)
G935846 NA other upstream 1145009 3550039 ~ 3550487 (+)
G934640 NA other upstream 2786416 1908660 ~ 1909080 (+)
G934579 NA other upstream 2868130 1826627 ~ 1827366 (+)
G937051 NA other downstream 323317 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 446729 5143317 ~ 5144565 (+)
G937237 NA other downstream 808116 5504704 ~ 5505329 (+)
G937889 NA other downstream 1424996 6121584 ~ 6122269 (+)
G938723 NA other downstream 2322563 7019151 ~ 7021424 (+)

Expression


Co-expression Network