XLOC_028541 (dmtf1)


Basic Information

Item Value
gene id XLOC_028541
gene name dmtf1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007115.7
NCBI id CM002888.2
chromosome length 78093715
location 9652216 ~ 9667410 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00055360
GCTGAGCATGAACACAGGCGATGTCCCGGCCACTGTGACACTTGAATCCGTCAATTCTGTCACATTTACCCAGGACACTGATGGAAACATCATACTGCACTGCCCTCAAAATGATGGGGAGGACCTGGGTTCAGACGAGACCACTGAACCGGTTCACAAACGAATACGATTGTCCAGTGAGGATGGAGAAGACCCTCAGGACTCTGCTTCGACTGAGTACTCTGTTGTCACCCTGCCAATTACAGATGGAGATGAAAGCTTCGAGGTGACAATGACTGCGACAGAGATGAGAGACGAGGAGCTGGAATCAGATGATCTTTCTGAAACAACAGGTAAGGATTCATCTGCACAGAAGAAAGGTGAAGATGTATCAGCTGTCAGTCAAGCTTGGTTCACCACAAAGGAGGATAAAGACACACTGGTCAATAAGGGTCACAAATGGAAACAGGGTATGTGGTCAAAAGAAGAGATTGATCTCCTGATGACCAACATAGAGCTTTATCTAAAGAACCGAGGGATTCAAGACCCTGCGGAGATCATCTTCGAGATGTCCAAAGAGGAGAGAAAGGATTTTTACCGCAGTATAGCCTGTGGTTTGAACAGGCCGCTGTTTGCTGTATACAGACGTGTGTTGCGAATGTACGATAACCGCAACCACGTAGGCAAATACACTGATGAGGAGATCAATAAACTGAAAGAACTAAGGCAGAAACATGGAAATGACTGGGCCACCATTGGGTCAGCTCTTGGCCGCAGCGCATCGTCTGTAAAGGATCGCTGCAGACTCATGAAAGACACATGCAACACCGGGAAGTGGACGGAGGAGGAGGAGAGGCGATTGGCAGAGGTGGTGCACGAGCTGACGGGCACAGAGGCGGGTGATGTTGTAACTCAGGGAGTCTCCTGGGCGTCAGTGGCTGAACTTGTCGGCACTCGCTCAGAGAAACAGTGCCGCTCTAAATGGCTCAACTACCTGAACTGGAAACAGAGCGGAGGCACAGAGTGGACCAAAGAAGATGACATCAACCTTGTTCGCAGGATAGCAGAGCTGGAAGTGGAGGATGAAAATGAGATCAACTGGGATATTCTGGCTAGTGGATGGAGCAGCGTTCGCTCGCCCCAGTGGCTGCGGAGCAAATGGTGGACCATCAAAAGACAAGTGGCCAATCACAAGGAACTTCCCTTTCCTGTGTTGCTGAAAGGGCTGCAGGATGTTGTGGAGGCACCGCCGTCTACCATGAACAAGGTGGTGGTGGTCGGTTCAAGATCTGCTAATGCTTCGCCCAGTCCTGTCACCGCTCTGCAGATCCCGGTCCAGATCCCAGTGCAGATCACACACGtctCTTCTTCAGATGGTTCGAGTGGTACTTCAGACAGTGAAACGATCACATTGAACTCCGGAGCTTTACAGACCTTTGAATTACTGCCTTCATTTCACCTGCAGCCCACCGGCACCCCTGGAACATATTTCCTCCAAACAGGAACCAATCAGAGCCTGCCACTCACGCTGTCAGCCAATCCCACAGTCACGCTCACAGCTGCCGCTTCACCATCTTCACCAGACCAGATCATCCTACACAGCCTTACGACTGACACAGAGAATGTGACCGTTCAGATGTCTCACCCCGGCATCATCATCCAGACAGTGACATCAGAGGACCTGGCAGACCCTCTCGGCCAATCAGAGCTTGAGGGAGAGCAGGTGCTGGTGAAGGAGGAGCCTTCAGAAAACCAAACCAACCCTGCAATAGAGGAGCCCAGTGAGGAGCAGTCAAAACAAGGAGAAAAGaCTCTGGACTCTTCTAAAGTCGTGGAGACTGTGCTCATGGTCCCGTCTCCAGGTAGCTTTATTCCCACTAACGAGGACATCAGCAGCGATTCGGTCCTGCCTCTTGGAACACTGACAGATCCCATTCTGGAGAACCAGGAAGAGGGATCAAACTGATCCTGGAGCAACATTGTAACCCGGACAGAAATTTAACACAACAGCAACACGAGACACTGACTTTAAAGAACCCGTTCCCTTATACAGGGACAAATGCAGCATGCAGGATCATCCAGACATCATGTGTGCGCACATGCCAACACTTTCtcagtatttattattaatcatgCAAGTTTCTGAGCCTCTCAGTGCagatgaaagggatagttcaaacaaaaaagcaaacatttactccccatttactcaccctgatttggttttaaacctttatgagttccttctttctgttgaacacaaaagaagacgttttgaagaaagttgtaaaccggtaactattgacatcaatagtatatatatatacatattttgaatgaactatccctttaaatactcTAATGAAGCAACACTTGCTTTTATATGGTGTATTAAAATGATGTAAtacgttaatgttgtttttttgtgtgtatatatatatatatcttgtttTGAATAGTTTTTGTAGCCTATGTTCCTGCTTAACAGTAATACTTGATAAAGCCACACAAAGCTGCACTGTTCTGACGTTATAGAGGTTGTACAACAATATTTGCATCATTCCATAATGTCCATTAGACTAGATGGCCATGATTTATCAAATGGTTTGAATATATTAACCTAACCTGTATATTAGCGCCTCGgtgtttatttattgaataaacaaaatgtcACCACTGACATGTCAGTGCTGTTTACTCATTATGGGATGATATCTTGTTGTGAATGAATAGGCTGATCAATTAAATGGAGTGCATTAGATTAACAAACAAGACAGCCATTTTTGCATTAACAAGAccttttttagacatttttattaaggttttatttatttttggtttaattttagtttattaatggtttaataaatatattctattacttatttttgtacaattaagttaaatgaataaagaaaatatatatttccatgCCACCATAGCTgaaatgaatttattattattttttttattcttattttgcttaatgtgactgtatattttaattaataaagtgGTTTCAGATAAGTCTTAGGTGTAAAAATGGGTTTAGCAAACTATAATGAACTGCTATAAATGTGATTTTATAATTGATAATTGAAGGACTTAATCGCTAAGTCTATTTTccttttgcattttatttgaggaggtctaaaatttaaatttttaagcgAAATTAAACATGATTGTGCAgatattaaagaataaatatgaaaataaactgaaaatcttttttttaagtttatatgtaattttatttattattattattgttttgttttttatttatttgctcataCACGAACTGGCCACAAGAGGGAGCTGATAAACCATAAACATTAAATAGATGATGAGTATGCAGATATTAAAAAAGCCTACATTTTCAGGACAGAAGTcattaaataaagtgaaaaatcttttttatttgtaagtttatttttaattttatttattcatgctttattgttgtttttatttattggaatGTACACAAATAGGCCACAAGAGGGAGCTGATAATCCATAAACAATAACTAGGgagtaaataaatgatgaggatgcagatattaaaaaaaacaatgttctgGACAGAAGTcattaaataaagtgaaaaatcCTCTCTTTTATTTGTaagtttgtgtttaattttatttatgccttattattgtttttatttatatgctTTTACACAAATTGGCCACAAGAGGGAGCTGATAATCCATAAACAACTAGTAAATAGATGATGAGGATGCAGATATCAAAAAACCTATATGTTTTGAACAGAAGtcattgaataaactgaaaaatcttctctttatTTGGTGagtttgtgtttaattttattaatgcttcattatagttttattttttatacaatttgCTCATGCA
>TCONS_00055361
GAAGGGGAAGAAAAAAAGCGTATTTTCCTCCATCCTGGTATTTGCCTTCATCCTGGTCACTGCGAAGTCCCCGTACCCAAAACAGGAAGCTGAGCATGAACACAGGCGATGTCCCGGCCACTGTGACACTTGAATCCGTCAATTCTGTCACATTTACCCAGGACACTGATGGAAACATCATACTGCACTGCCCTCAAAATGATGGGGAGGACCTGGGTTCAGACGAGACCACTGAACCGGTTCACAAACGAATACGATTGTCCAGTGAGGATGGAGAAGACCCTCAGGACTCTGCTTCGACTGAGTACTCTGTTGTCACCCTGCCAATTACAGATGGAGATGAAAGCTTCGAGGTGACAATGACTGCGACAGAGATGAGAGACGAGGAGCTGGAATCAGATGATCTTTCTGAAACAACAGGTAAGGATTCATCTGCACAGAAGAAAGGTGAAGATGTATCAGCTGTCAGTCAAGCTTGGTTCACCACAAAGGAGGATAAAGACACACTGGTCAATAAGGGTCACAAATGGAAACAGGGTATGTGGTCAAAAGAAGAGATTGATCTCCTGATGACCAACATAGAGCTTTATCTAAAGAACCGAGGGATTCAAGACCCTGCGGAGATCATCTTCGAGATGTCCAAAGAGGAGAGAAAGGATTTTTACCGCAGTATAGCCTGTGGTTTGAACAGGCCGCTGTTTGCTGTATACAGACGTGTGTTGCGAATGTACGATAACCGCAACCACGTAGGCAAATACACTGATGAGGAGATCAATAAACTGAAAGAACTAAGGCAGAAACATGGAAATGACTGGGCCACCATTGGGTCAGCTCTTGGCCGCAGCGCATCGTCTGTAAAGGATCGCTGCAGACTCATGAAAGACACATGCAACACCGGGAAGTGGACGGAGGAGGAGGAGAGGCGATTGGCAGAGGTGGTGCACGAGCTGACGGGCACAGAGGCGGGTGATGTTGTAACTCAGGGAGTCTCCTGGGCGTCAGTGGCTGAACTTGTCGGCACTCGCTCAGAGAAACAGTGCCGCTCTAAATGGCTCAACTACCTGAACTGGAAACAGAGCGGAGGCACAGAGTGGACCAAAGAAGATGACATCAACCTTGTTCGCAGGATAGCAGAGCTGGAAGTGGAGGATGAAAATGAGATCAACTGGGATATTCTGGCTAGTGGATGGAGCAGCGTTCGCTCGCCCCAGTGGCTGCGGAGCAAATGGTGGACCATCAAAAGACAAGTGGCCAATCACAAGGAACTTCCCTTTCCTGTGTTGCTGAAAGGGCTGCAGGATGTTGTGGAGGCACCGCCGTCTACCATGAACAAGGTGGTGGTGGTCGGTTCAAGATCTGCTAATGCTTCGCCCAGTCCTGTCACCGCTCTGCAGATCCCGGTCCAGATCCCAGTGCAGATCACACACGtctCTTCTTCAGATGGTTCGAGTGGTACTTCAGACAGTGAAACGATCACATTGAACTCCGGAGCTTTACAGACCTTTGAATTACTGCCTTCATTTCACCTGCAGCCCACCGGCACCCCTGGAACATATTTCCTCCAAACAGGAACCAATCAGAGCCTGCCACTCACGCTGTCAGCCAATCCCACAGTCACGCTCACAGCTGCCGCTTCACCATCTTCACCAGACCAGATCATCCTACACAGCCTTACGAATGTGACCGTTCAGATGTCTCACCCCGGCATCATCATCCAGACAGTGACATCAGAGGACCTGGCAGACCCTCTCGGCCAATCAGAGCTTGAGGGAGAGCAGGTGCTGGTGAAGGAGGAGCCTTCAGAAAACCAAACCAACCCTGCAATAGAGGAGCCCAGTGAGGAGCAGTCAAAACAAGGAGAAAAGaCTCTGGACTCTTCTAAAGTCGTGGAGACTGTGCTCATGGTCCCGTCTCCAGGTAGCTTTATTCCCACTAACGAGGACATCAGCAGCGATTCGGTCCTGCCTCTTGGAACACTGACAGATCCCATTCTGGAGAACCAGGAAGAGGGATCAAACTGATCCTGGAGCAACATTGTAACCCGGACAGAAATTTAACACAACAGCAACACGAGACACTGACTTTAAAGAACCCGTTCCCTTATACAGGGACAAATGCAGCATGCAGGATCATCCAGACATCATGTGTGCGCACATGCCAACACTTTCtcagtatttattattaatcatgCAAGTTTCTGAGCCTCTCAGTGCagatgaaagggatagttcaaacaaaaaagcaaacatttactccccatttactcaccctgatttggttttaaacctttatgagttccttctttctgttgaacacaaaagaagacgttttgaagaaagttgtaaaccggtaactattgacatcaatagtatatatatatacatattttgaatgaactatccctttaaatactcTAATGAAGCAACACTTGCTTTTATATGGTGTATTAAAATGATGTAAtacgttaatgttgtttttttgtgtgtatatatatatatatcttgtttTGAATAGTTTTTGTAGCCTATGTTCCTGCTTAACAGTAATACTTGATAAAGCCACACAAAGCTGCACTGTTCTGACGTTATAGAGGTTGTACAACAATATTTGCATCATTCCATAATGTCCATTAGACTAGATGGCCATGATTTATCAAATGGTTTGAATATATTAACCTAACCTGTATATTAGCGCCTCGgtgtttatttattgaataaacaaaatgtcACCACTGA
>TCONS_00055362
CATCCTGGTATTTGCCTTCATCCTGGTCACTGCGAAGTCCCCGTACCCAAAACAGGAAGCTGAGCATGAACACAGGCGATGTCCCGGCCACTGTGACACTTGAATCCGTCAATTCTGTCACATTTACCCAGGACACTGATGGAAACATCATACTGCACTGCCCTCAAAATGATGGGGAGGACCTGGGTTCAGACGAGACCACTGAACCGGTTCACAAACGAATACGATTGTCCAGTGAGGATGGAGAAGACCCTCAGGACTCTGCTTCGACTGAGTACTCTGTTGTCACCCTGCCAATTACAGATGGAGATGAAAGCTTCGAGGTGACAATGACTGCGACAGAGATGAGAGACGAGGAGCTGGAATCAGATGATCTTTCTGAAACAACAGGTAAGGATTCATCTGCACAGAAGAAAGGTGAAGATGTATCAGCTGTCAGTCAAGCTTGGTTCACCACAAAGGAGGATAAAGACACACTGGTCAATAAGGGTCACAAATGGAAACAGGGTATGTGGTCAAAAGAAGAGATTGATCTCCTGATGACCAACATAGAGCTTTATCTAAAGAACCGAGGGATTCAAGACCCTGCGGAGATCATCTTCGAGATGTCCAAAGAGGAGAGAAAGGATTTTTACCGCAGTATAGCCTGTGGTTTGAACAGGCCGCTGTTTGCTGTATACAGACGTGTGTTGCGAATGTACGATAACCGCAACCACGTAGGCAAATACACTGATGAGGAGATCAATAAACTGAAAGAACTAAGGCAGAAACATGGAAATGACTGGGCCACCATTGGGTCAGCTCTTGGCCGCAGCGCATCGTCTGTAAAGGATCGCTGCAGACTCATGAAAGACACATGCAACACCGGGAAGTGGACGGAGGAGGAGGAGAGGCGATTGGCAGAGGTGGTGCACGAGCTGACGGGCACAGAGGCGGGTGATGTTGTAACTCAGGGAGTCTCCTGGGCGTCAGTGGCTGAACTTGTCGGCACTCGCTCAGAGAAACAGTGCCGCTCTAAATGGCTCAACTACCTGAACTGGAAACAGAGCGGAGGCACAGAGTGGACCAAAGAAGATGACATCAACCTTGTTCGCAGGATAGCAGAGCTGGAAGTGGAGGATGAAAATGAGATCAACTGGGATATTCTGGCTAGTGGATGGAGCAGCGTTCGCTCGCCCCAGTGGCTGCGGAGCAAATGGTGGACCATCAAAAGACAAGTGGCCAATCACAAGGAACTTCCCTTTCCTGTGTTGCTGAAAGGGCTGCAGGATGTTGTGGAGGCACCGCCGTCTACCATGAACAAGGTGGTGGTGGTCGGTTCAAGATCTGCTAATGCTTCGCCCAGTCCTGTCACCGCTCTGCAGATCCCGGTCCAGATCCCAGTGCAGATCACACACGtctCTTCTTCAGATGGTTCGAGTGGTACTTCAGACAGTGAAACGATCACATTGAACTCCGGAGCTTTACAGACCTTTGAATTACTGCCTTCATTTCACCTGCAGCCCACCGGCACCCCTGGAACATATTTCCTCCAAACAGGAACCAATCAGAGCCTGCCACTCACGCTGTCAGCCAATCCCACAGTCACGCTCACAGCTGCCGCTTCACCATCTTCACCAGACCAGATCATCCTACACAGCCTTACGACTGACACAGAGAATGTGACCGTTCAGATGTCTCACCCCGGCATCATCATCCAGACAGTGACATCAGAGGACCTGGCAGACCCTCTCGGCCAATCAGAGCTTGAGGGAGAGCAGGTGCTGGTGAAGGAGGAGCCTTCAGAAAACCAAACCAACCCTGCAATAGAGGAGCCCAGTGAGGAGCAGTCAAAACAAGGAGAAAAGaCTCTGGACTCTTCTAAAGTCGTGGAGACTGTGCTCATGGTCCCGTCTCCAGGTAGCTTTATTCCCACTAACGAGGACATCAGCAGCGATTCGGTCCTGCCTCTTGGAACACTGACAGATCCCATTCTGGAGAACCAGGAAGAGGGATCAAACTGATCCTGGAGCAACATTGTAACCCGGACAGAAATTTAACACAACAGCAACACGAGACACTGACTTTAAAGAACCCGTTCCCTTATACAGGGACAAATGCAGCATGCAGGATCATCCAGACATCATGTGTGCGCACATGCCAACACTTTCtcagtatttattattaatcatgCAAGTTTCTGAGCCTCTCAGTGCagatgaaagggatagttcaaacaaaaaagcaaacatttactccccatttactcaccctgatttggttttaaacctttatgagttccttctttctgttgaacacaaaagaagacgttttgaagaaagttgtaaaccggtaactattgacatcaatagtatatatatatacatattttgaatgaactatccctttaaatactcTAATGAAGCAACACTTGCTTTTATATGGTGTATTAAAATGATGTAAtacgttaatgttgtttttttgtgtgtatatatatatatatcttgtttTGAATAGTTTTTGTAGCCTATGTTCCTGCTTAACAGTAATACTTGATAAAGCCACACAAAGCTGCACTGTTCTGACGTTATAGAGGTTGTACAACAATATTTGCATCATTCCATAATGTCCATTAGACTAGATGGCCATGATTTATCAAATGGTTTGAATATATTAACCTAACCTGTATATTAGCGCCTCGgtgtttatttattgaataaacaaaatgtcACCACTG
>TCONS_00055363
ATGAACACAGGCGATGTCCCGGCCACTGTGACACTTGAATCCGTCAATTCTGTCACATTTACCCAGGACACTGATGGAAACATCATACTGCACTGCCCTCAAAATGATGGGGAGGACCTGGGTTCAGACGAGACCACTGAACCGGTTCACAAACGAATACGATTGTCCAGTGAGGATGGAGAAGACCCTCAGGACTCTGCTTCGACTGAGTACTCTGTTGTCACCCTGCCAATTACAGATGGAGATGAAAGCTTCGAGGTGACAATGACTGCGACAGAGATGAGAGACGAGGAGCTGGAATCAGATGATCTTTCTGAAACAACAGGTAAGGATTCATCTGCACAGAAGAAAGGTGAAGATGTATCAGCTGTCAGTCAAGCTTGGTTCACCACAAAGGAGGATAAAGACACACTGGTCAATAAGGGTCACAAATGGAAACAGGGTATGTGGTCAAAAGAAGAGATTGATCTCCTGATGACCAACATAGAGCTTTATCTAAAGAACCGAGGGATTCAAGACCCTGCGGAGATCATCTTCGAGATGTCCAAAGAGGAGAGAAAGGATTTTTACCGCAGTATAGCCTGTGGTTTGAACAGGCCGCTGTTTGCTGTATACAGACGTGTGTTGCGAATGTACGATAACCGCAACCACGTAGGCAAATACACTGATGAGGAGATCAATAAACTGAAAGAACTAAGGCAGAAACATGGAAATGACTGGGCCACCATTGGGTCAGCTCTTGGCCGCAGCGCATCGTCTGTAAAGGATCGCTGCAGACTCATGAAAGACACATGCAACACCGGGAAGTGGACGGAGGAGGAGGAGAGGCGATTGGCAGAGGTGGTGCACGAGCTGACGGGCACAGAGGCGGGTGATGTTGTAACTCAGGGAGTCTCCTGGGCGTCAGTGGCTGAACTTGTCGGCACTCGCTCAGAGAAACAGTGCCGCTCTAAATGGCTCAACTACCTGAACTGGAAACAGAGCGGAGGCACAGAGTGGACCAAAGAAGATGACATCAACCTTGTTCGCAGGATAGCAGAGCTGGAAGTGGAGGATGAAAATGAGATCAACTGGGATATTCTGGCTAGTGGATGGAGCAGCGTTCGCTCGCCCCAGTGGCTGCGGAGCAAATGGTGGACCATCAAAAGACAAGTGGCCAATCACAAGGAACTTCCCTTTCCTGCTTCTTCAGATGGTTCGAGTGGTACTTCAGACAGTGAAACGATCACATTGAACTCCGGAGCTTTACAGACCTTTGAATTACTGCCTTCATTTCACCTGCAGCCCACCGGCACCCCTGGAACATATTTCCTCCAAACAGGAACCAATCAGAGCCTGCCACTCACGCTGTCAGCCAATCCCACAGTCACGCTCACAGCTGCCGCTTCACCATCTTCACCAGACCAGATCATCCTACACAGCCTTACGAATGTGACCGTTCAGATGTCTCACCCCGGCATCATCATCCAGACAGTGACATCAGAGGACCTGGCAGACCCTCTCGGCCAATCAGAGCTTGAGGGAGAGCAGGTGCTGGTGAAGGAGGAGCCTTCAGAAAACCAAACCAACCCTGCAATAGAGGAGCCCAGTGAGGAGCAGTCAAAACAAGGAGAAAAGaCTCTGGACTCTTCTAAAGTCGTGGAGACTGTGCTCATGGTCCCGTCTCCAGGTAGCTTTATTCCCACTAACGAGGACATCAGCAGCGATTCGGTCCTGCCTCTTGGAACACTGACAGATCCCATTCTGGAGAACCAGGAAGAGGGATCAAACTGA
>TCONS_00055364
GGAGGACATCACATATATACCATATaattgcaggttaactatgtttaacTTTACCtgttaaaagcaattagttaccagttaattagttaaagttattagtatcTAATAGGGTTaaagtaactaataaccttaaatTTTCAGAAtttaattgtaatgcaataatgtgcgtctttggtaaagctgctttgaaacaataatattgtgaaaagcacaatacaaataaacctgaattgaGTTTAATTGAATACTATGTTTTACCCTGTAGGCTGAGCATGAACACAGGCGATGTCCCGGCCACTGTGACACTTGAATCCGTCAATTCTGTCACATTTACCCAGGACACTGATGGAAACATCATACTGCACTGCCCTCAAAATGATGGGGAGGACCTGGGTTCAGACGAGACCACTGAACCGGTTCACAAACGAATACGATTGTCCAGTGAGGATGGAG

Function

symbol description
dmtf1 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human DMTF1 (cyclin D binding myb like transcription factor 1).

GO:

id name namespace
GO:0007049 cell cycle biological_process
GO:0005634 nucleus cellular_component
GO:0005654 nucleoplasm cellular_component
GO:0003677 DNA binding molecular_function
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding molecular_function

KEGG:

id description
ko03000 Transcription factors

ZFIN:

id description
ZDB-GENE-040718-413 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human DMTF1 (cyclin D binding myb like transcription factor 1).

Ensembl:

ensembl_id ENSDARG00000025824

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00055360 False 3866 mRNA 0.40 16 9652216 9665002
TCONS_00055361 False 2735 mRNA 0.47 17 9653423 9667410
TCONS_00055362 False 2716 mRNA 0.47 17 9653424 9667380
TCONS_00055363 False 1773 mRNA 0.50 15 9654137 9664995
TCONS_00055364 True 453 mRNA 0.37 2 9664717 9665267

Neighbor

gene id symbol gene type direction distance location
XLOC_028540 BX901962.1 coding downstream 248 9649283 ~ 9651968 (-)
XLOC_028539 dclre1c coding downstream 14818 9603306 ~ 9637398 (-)
XLOC_028538 cdnf coding downstream 59814 9587968 ~ 9592402 (-)
XLOC_028537 shank3b coding downstream 65503 9555280 ~ 9586713 (-)
XLOC_028536 tymp coding downstream 102523 9543459 ~ 9549693 (-)
XLOC_028542 tspan9b coding upstream 29555 9696965 ~ 9722568 (-)
XLOC_028543 mical3b coding upstream 56782 9724192 ~ 9764769 (-)
XLOC_028544 svopl coding upstream 101640 9769050 ~ 9781132 (-)
XLOC_028545 si:dkeyp-27e10.3 coding upstream 116891 9784301 ~ 9810999 (-)
XLOC_028546 parp12b coding upstream 146343 9813753 ~ 9822519 (-)
XLOC_028534 NA non-coding downstream 130274 9514548 ~ 9521942 (-)
XLOC_028533 NA non-coding downstream 262568 9388818 ~ 9389648 (-)
XLOC_028527 NA non-coding downstream 601271 9048306 ~ 9050945 (-)
XLOC_028525 NA non-coding downstream 746763 8904291 ~ 8905453 (-)
XLOC_028551 NA non-coding upstream 679328 10346738 ~ 10348612 (-)
XLOC_028553 BX897748.1 non-coding upstream 994151 10661561 ~ 10661677 (-)
XLOC_028554 NA non-coding upstream 1081567 10748977 ~ 10752941 (-)
XLOC_028555 NA non-coding upstream 1098604 10766014 ~ 10835620 (-)
XLOC_028556 NA non-coding upstream 1104464 10771874 ~ 10785654 (-)

Expression


Co-expression Network