G936862


Basic Information

Item Value
gene id G936862
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4765985 ~ 4766315 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068485
gtactatggtgttgaatgcagagctgtagtcaatgaacagcattctcgcataggtattcctcttgtccagatgggttagggcagtgtgcagtgtggttgagattgcatcgtctgtggacctatttgggcggtaagcaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttgactagtctctcaaagcacttcatgatgacggaagtgagtgctacggggcggtagtcgtttagctcaggtaccttagctttcttgggaacaggaacaatggtggccctcttgaagcatgtgggaacagcagactggtataggga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068485 True 331 lncRNA 0.50 1 4765985 4766315

Neighbor

gene id symbol gene type direction distance location
LOC118937435 msc coding upstream 179403 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 197394 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 648582 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 742293 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 744653 4021240 ~ 4021332 (+)
eya1 LOC106590661 coding downstream 53430 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 192729 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 402572 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 426866 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 666011 5432326 ~ 5439359 (+)
G936860 NA non-coding upstream 1082 4764615 ~ 4764903 (+)
G936853 NA non-coding upstream 9677 4755875 ~ 4756308 (+)
G936851 NA non-coding upstream 12833 4752934 ~ 4753152 (+)
G936841 NA non-coding upstream 30557 4735218 ~ 4735428 (+)
G936839 NA non-coding upstream 31754 4733595 ~ 4734231 (+)
G936864 NA non-coding downstream 629 4766944 ~ 4767270 (+)
G936869 NA non-coding downstream 6848 4773163 ~ 4776064 (+)
G936870 NA non-coding downstream 7268 4773583 ~ 4773831 (+)
G936876 NA non-coding downstream 24391 4790706 ~ 4792612 (+)
G936905 NA non-coding downstream 43463 4809778 ~ 4810088 (+)
G935977 NA other upstream 783787 3981851 ~ 3982198 (+)
G935976 NA other upstream 784834 3980771 ~ 3981151 (+)
G935846 NA other upstream 1215498 3550039 ~ 3550487 (+)
G934640 NA other upstream 2856905 1908660 ~ 1909080 (+)
G934579 NA other upstream 2938619 1826627 ~ 1827366 (+)
G937051 NA other downstream 253590 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 377002 5143317 ~ 5144565 (+)
G937237 NA other downstream 738389 5504704 ~ 5505329 (+)
G937889 NA other downstream 1355269 6121584 ~ 6122269 (+)
G938723 NA other downstream 2252836 7019151 ~ 7021424 (+)

Expression


Co-expression Network