Gene
RNA
| Item | Value |
|---|---|
| gene id | G936870 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 4773583 ~ 4773831 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1068493 | True | 200 | lncRNA | 0.49 | 2 | 4773583 | 4773831 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937435 | msc | coding | upstream | 187001 | 4583616 ~ 4586582 (+) |
| LOC110536527 | trpa1 | coding | upstream | 204992 | 4491768 ~ 4568591 (+) |
| LOC118937460 | NA | coding | upstream | 656180 | 4109412 ~ 4117403 (+) |
| LOC118937480 | NA | coding | upstream | 749891 | 4023597 ~ 4023692 (+) |
| LOC118937479 | NA | coding | upstream | 752251 | 4021240 ~ 4021332 (+) |
| eya1 | LOC106590661 | coding | downstream | 45914 | 4819745 ~ 4956185 (+) |
| LOC118937293 | NA | coding | downstream | 185213 | 4959044 ~ 4963664 (+) |
| LOC100136147 | tram1 | coding | downstream | 395056 | 5168887 ~ 5184807 (+) |
| LOC110536532 | LOC106579720 | coding | downstream | 419350 | 5193181 ~ 5518848 (+) |
| LOC110535182 | prdm14 | coding | downstream | 658495 | 5432326 ~ 5439359 (+) |
| G936864 | NA | non-coding | upstream | 6313 | 4766944 ~ 4767270 (+) |
| G936862 | NA | non-coding | upstream | 7268 | 4765985 ~ 4766315 (+) |
| G936860 | NA | non-coding | upstream | 8680 | 4764615 ~ 4764903 (+) |
| G936853 | NA | non-coding | upstream | 17275 | 4755875 ~ 4756308 (+) |
| G936851 | NA | non-coding | upstream | 20431 | 4752934 ~ 4753152 (+) |
| G936876 | NA | non-coding | downstream | 16875 | 4790706 ~ 4792612 (+) |
| G936905 | NA | non-coding | downstream | 35947 | 4809778 ~ 4810088 (+) |
| G936917 | NA | non-coding | downstream | 65009 | 4838840 ~ 4841960 (+) |
| G937038 | NA | non-coding | downstream | 230137 | 5003968 ~ 5004666 (+) |
| G937071 | NA | non-coding | downstream | 307233 | 5081064 ~ 5085992 (+) |
| G935977 | NA | other | upstream | 791385 | 3981851 ~ 3982198 (+) |
| G935976 | NA | other | upstream | 792432 | 3980771 ~ 3981151 (+) |
| G935846 | NA | other | upstream | 1223096 | 3550039 ~ 3550487 (+) |
| G934640 | NA | other | upstream | 2864503 | 1908660 ~ 1909080 (+) |
| G934579 | NA | other | upstream | 2946217 | 1826627 ~ 1827366 (+) |
| G937051 | NA | other | downstream | 246074 | 5019905 ~ 5028145 (+) |
| G937096 | xkr9 | other | downstream | 369486 | 5143317 ~ 5144565 (+) |
| G937237 | NA | other | downstream | 730873 | 5504704 ~ 5505329 (+) |
| G937889 | NA | other | downstream | 1347753 | 6121584 ~ 6122269 (+) |
| G938723 | NA | other | downstream | 2245320 | 7019151 ~ 7021424 (+) |
