G936876


Basic Information

Item Value
gene id G936876
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4790706 ~ 4792612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068501
ACAAAAGTAGGTCAACAACAACAGTAGGTCATCAACAACAGTAGGTCATCAACAACAGTAGGTCATCAACAACAGTAGGTCTACAACAACAGTAGGTCATCAACAACAGTAGGTCATCAACAACAGTAGgtcatcaacaacagtaggtcaacaacaacagtaggacaacaacaacaacagtaggtcaacaacaaaagtaggtcaacaacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068501 True 212 lncRNA 0.40 3 4790706 4792612

Neighbor

gene id symbol gene type direction distance location
LOC118937435 msc coding upstream 204124 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 222115 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 673303 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 767014 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 769374 4021240 ~ 4021332 (+)
eya1 LOC106590661 coding downstream 27133 4819745 ~ 4956185 (+)
LOC118937293 NA coding downstream 166432 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 376275 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 400569 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 639714 5432326 ~ 5439359 (+)
G936869 NA non-coding upstream 14642 4773163 ~ 4776064 (+)
G936870 NA non-coding upstream 16875 4773583 ~ 4773831 (+)
G936864 NA non-coding upstream 23436 4766944 ~ 4767270 (+)
G936862 NA non-coding upstream 24391 4765985 ~ 4766315 (+)
G936860 NA non-coding upstream 25803 4764615 ~ 4764903 (+)
G936905 NA non-coding downstream 17166 4809778 ~ 4810088 (+)
G936917 NA non-coding downstream 46228 4838840 ~ 4841960 (+)
G937038 NA non-coding downstream 211356 5003968 ~ 5004666 (+)
G937071 NA non-coding downstream 288452 5081064 ~ 5085992 (+)
G937082 NA non-coding downstream 345388 5138000 ~ 5187878 (+)
G935977 NA other upstream 808508 3981851 ~ 3982198 (+)
G935976 NA other upstream 809555 3980771 ~ 3981151 (+)
G935846 NA other upstream 1240219 3550039 ~ 3550487 (+)
G934640 NA other upstream 2881626 1908660 ~ 1909080 (+)
G934579 NA other upstream 2963340 1826627 ~ 1827366 (+)
G937051 NA other downstream 227293 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 350705 5143317 ~ 5144565 (+)
G937237 NA other downstream 712092 5504704 ~ 5505329 (+)
G937889 NA other downstream 1328972 6121584 ~ 6122269 (+)
G938723 NA other downstream 2226539 7019151 ~ 7021424 (+)

Expression


Co-expression Network