G936917


Basic Information

Item Value
gene id G936917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 4838840 ~ 4841960 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068559
ctataaaacagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactataaaacagactaatggactgtagaacagactaatggttgagactagtggactataaaacagactaatggttgagactagttgactatagaccagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactaaaaaaagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactatagaccagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactgtAGTGGAGACTAGTGGACTGTAGAGGAGACTAGTGGACTGTAGgggagactagtggactataaaacagactaatggttgagactagtggactataaaacagactaatggttgaggCTAGTGGACTATAGAccagactaatggttgagactagtggactatagaccagactaatggactataaaacagactaatggttgagactagtggactatagaccagactaatggttgagactagtggactatagaggagactagtggactataaaacagactaatggttgagactagtggactataaaacagactaatggttgagactagtgtactataaaacagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactatagaccagactaatggttgagactagtggactataatacagactaatggttgagactagtggactataaaacagactaacggttgagactagtggactataaaacagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactatagacCAGACTAATGGATGAGACTAATGGACAGTAGtacagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactataaaacagactaatggttgagactagtggactatagaccagactaatggttgagactaatggactgtagtacagactaatggttgagactagtggactataaaacagactaatggttgagactaaTGGACTATAGTCCAGACTAGTGGACTGTAGAACAGACTAGTGGACTGTAGACCAGACTAGTGGACTGTAGAccagactagtggactatagaccagactaatggactgtagaccagactagtggactatagaccagactagtggactatagaccagactaatggactatagaccagactaatggactgtagaccagactaatggactatagaccagactaatggactatagaccagactaatggactgtagaccagactaatggactgtagaccagactaatggactgtagaccagactaatggactgtagaccagactaatggactgtagacCAGACGAATGGACTAtagaccagactaatGGACTATAGACCAGACCAATGGACTGtagaccagactaatggactATAGACC

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584499

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068559 True 1551 lncRNA 0.40 6 4838840 4841960

Neighbor

gene id symbol gene type direction distance location
LOC118937435 msc coding upstream 252258 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 270249 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 721437 4109412 ~ 4117403 (+)
LOC118937480 NA coding upstream 815148 4023597 ~ 4023692 (+)
LOC118937479 NA coding upstream 817508 4021240 ~ 4021332 (+)
LOC118937293 NA coding downstream 117084 4959044 ~ 4963664 (+)
LOC100136147 tram1 coding downstream 326927 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 351221 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 590366 5432326 ~ 5439359 (+)
LOC110535189 LOC106579706 coding downstream 1186700 6028660 ~ 6038322 (+)
G936905 NA non-coding upstream 28752 4809778 ~ 4810088 (+)
G936876 NA non-coding upstream 46228 4790706 ~ 4792612 (+)
G936869 NA non-coding upstream 62776 4773163 ~ 4776064 (+)
G936870 NA non-coding upstream 65009 4773583 ~ 4773831 (+)
G936864 NA non-coding upstream 71570 4766944 ~ 4767270 (+)
G937038 NA non-coding downstream 162008 5003968 ~ 5004666 (+)
G937071 NA non-coding downstream 239104 5081064 ~ 5085992 (+)
G937082 NA non-coding downstream 296040 5138000 ~ 5187878 (+)
G937098 NA non-coding downstream 306493 5148453 ~ 5153171 (+)
G937100 NA non-coding downstream 307503 5149463 ~ 5152815 (+)
G935977 NA other upstream 856642 3981851 ~ 3982198 (+)
G935976 NA other upstream 857689 3980771 ~ 3981151 (+)
G935846 NA other upstream 1288353 3550039 ~ 3550487 (+)
G934640 NA other upstream 2929760 1908660 ~ 1909080 (+)
G934579 NA other upstream 3011474 1826627 ~ 1827366 (+)
G937051 NA other downstream 177945 5019905 ~ 5028145 (+)
G937096 xkr9 other downstream 301357 5143317 ~ 5144565 (+)
G937237 NA other downstream 662744 5504704 ~ 5505329 (+)
G937889 NA other downstream 1279624 6121584 ~ 6122269 (+)
G938723 NA other downstream 2177191 7019151 ~ 7021424 (+)

Expression


Co-expression Network