G937096 (xkr9)


Basic Information

Item Value
gene id G937096
gene name xkr9
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 5143317 ~ 5144565 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1068784
GTTAAACTAGCAGGAACAGTGGAAAGTGTGTCAGAGATTAAAGTAAATTAGACATCTTTCAGTTATTGGCAGGTCAGTAAAAGAGTCTTTAACATATCAAATAAAATGTCCATAGCAACGTCAACGTCCATAGCAACGTCACCATAGCAACGTCAACGTCCTTAGCAACGTCTTCCTCTTCACTTTACCCTAAAATGATAGATGGCCATAGCCTGTAAAGAGAGACAACAGTGCCACcttgtgttctctgttttgcgTTGCACATCCTGAATCCACAGACAGGGGCTGTGTTTCACTAGCGTGAAGTGACTCCCTTatgtcctctccttcatctcagcTGAAGGGACCAGACCTGAAAGGTCAAACATCAGACTCCTTTTTAACTGTTCAGGTCGTTCAGGTCGTTCAGGTCTTTCAGGTCGTTCAGGTCGTTCAGGTCTTTCAGGTCGTTCAGGTCTATCAGGTCGTTCAGGTCTTTCAGGTCTTTCAGGTCGTTCAGGTCGTTCAGAGTGGTGCAGGAAACGAGGCTCAGAGCTGTAGGAAGTTCCTAACTCTCACCATGTTGTCTGgcgtctctgtttctctctcctgtcccatGTGTCCATCCACCTCATCTGCCTGTAGACTCCTCCCTCTGGGGTGGCAGACAGCATAATACAGGAGCAGACAGACCAGCCCTAGAACGGTCCCTCCAAATATCAGCAGAGTCACCGGCCAAAAGTACTCAGTGGCGTTAACCTCTGGC

Function

symbol description
xkr9 Predicted to be involved in apoptotic process involved in development; engulfment of apoptotic cell; and phosphatidylserine exposure on apoptotic cell surface. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Orthologous to human XKR9 (XK related 9).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1068784 True 745 TUCP 0.48 2 5143317 5144565

Neighbor

gene id symbol gene type direction distance location
LOC118937293 NA coding upstream 179653 4959044 ~ 4963664 (+)
eya1 LOC106590661 coding upstream 187132 4819745 ~ 4956185 (+)
LOC118937435 msc coding upstream 556735 4583616 ~ 4586582 (+)
LOC110536527 trpa1 coding upstream 574726 4491768 ~ 4568591 (+)
LOC118937460 NA coding upstream 1025914 4109412 ~ 4117403 (+)
LOC100136147 tram1 coding downstream 24322 5168887 ~ 5184807 (+)
LOC110536532 LOC106579720 coding downstream 48616 5193181 ~ 5518848 (+)
LOC110535182 prdm14 coding downstream 287761 5432326 ~ 5439359 (+)
LOC110535189 LOC106579706 coding downstream 884095 6028660 ~ 6038322 (+)
LOC110536599 LOC106579705 coding downstream 897277 6041842 ~ 6098398 (+)
G937071 NA non-coding upstream 57325 5081064 ~ 5085992 (+)
G937038 NA non-coding upstream 138651 5003968 ~ 5004666 (+)
G936917 NA non-coding upstream 301357 4838840 ~ 4841960 (+)
G936905 NA non-coding upstream 333229 4809778 ~ 4810088 (+)
G936876 NA non-coding upstream 350705 4790706 ~ 4792612 (+)
G937098 NA non-coding downstream 3888 5148453 ~ 5153171 (+)
G937100 NA non-coding downstream 4898 5149463 ~ 5152815 (+)
G937104 NA non-coding downstream 15055 5159620 ~ 5160038 (+)
G937182 NA non-coding downstream 153674 5298239 ~ 5306964 (+)
G937190 NA non-coding downstream 162514 5307079 ~ 5308063 (+)
G937051 NA other upstream 115172 5019905 ~ 5028145 (+)
G935977 NA other upstream 1161119 3981851 ~ 3982198 (+)
G935976 NA other upstream 1162166 3980771 ~ 3981151 (+)
G935846 NA other upstream 1592830 3550039 ~ 3550487 (+)
G934640 NA other upstream 3234237 1908660 ~ 1909080 (+)
G937237 NA other downstream 360139 5504704 ~ 5505329 (+)
G937889 NA other downstream 977019 6121584 ~ 6122269 (+)
G938723 NA other downstream 1874586 7019151 ~ 7021424 (+)
G939408 NA other downstream 2429787 7574352 ~ 7574909 (+)
G939544 NA other downstream 2675955 7820520 ~ 7823317 (+)

Expression


Co-expression Network