Gene
RNA
| Item | Value |
|---|---|
| gene id | G937197 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 5350463 ~ 5350802 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1068892 | True | 244 | lncRNA | 0.55 | 2 | 5350463 | 5350802 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136147 | tram1 | coding | upstream | 165656 | 5168887 ~ 5184807 (+) |
| LOC118937293 | NA | coding | upstream | 386799 | 4959044 ~ 4963664 (+) |
| eya1 | LOC106590661 | coding | upstream | 394278 | 4819745 ~ 4956185 (+) |
| LOC118937435 | msc | coding | upstream | 763881 | 4583616 ~ 4586582 (+) |
| LOC110536527 | trpa1 | coding | upstream | 781872 | 4491768 ~ 4568591 (+) |
| LOC110535182 | prdm14 | coding | downstream | 81524 | 5432326 ~ 5439359 (+) |
| LOC110535189 | LOC106579706 | coding | downstream | 677858 | 6028660 ~ 6038322 (+) |
| LOC110536599 | LOC106579705 | coding | downstream | 691040 | 6041842 ~ 6098398 (+) |
| LOC110535186 | LOC106579708 | coding | downstream | 776573 | 6127375 ~ 6139717 (+) |
| LOC110535188 | LOC106579710 | coding | downstream | 790913 | 6141715 ~ 6148083 (+) |
| G937190 | NA | non-coding | upstream | 42400 | 5307079 ~ 5308063 (+) |
| G937182 | NA | non-coding | upstream | 43499 | 5298239 ~ 5306964 (+) |
| G937082 | NA | non-coding | upstream | 162585 | 5138000 ~ 5187878 (+) |
| LOC110536532 | LOC106579720 | non-coding | downstream | 76419 | 5193181 ~ 5518848 (+) |
| G937236 | NA | non-coding | downstream | 153715 | 5504517 ~ 5506154 (+) |
| G937438 | NA | non-coding | downstream | 195605 | 5546407 ~ 5547599 (+) |
| G937439 | NA | non-coding | downstream | 198784 | 5549586 ~ 5550268 (+) |
| G937464 | NA | non-coding | downstream | 241298 | 5592100 ~ 5593586 (+) |
| G937096 | xkr9 | other | upstream | 205898 | 5143317 ~ 5144565 (+) |
| G937051 | NA | other | upstream | 322318 | 5019905 ~ 5028145 (+) |
| G935977 | NA | other | upstream | 1368265 | 3981851 ~ 3982198 (+) |
| G935976 | NA | other | upstream | 1369312 | 3980771 ~ 3981151 (+) |
| G935846 | NA | other | upstream | 1799976 | 3550039 ~ 3550487 (+) |
| G937237 | NA | other | downstream | 153902 | 5504704 ~ 5505329 (+) |
| G937889 | NA | other | downstream | 770782 | 6121584 ~ 6122269 (+) |
| G938723 | NA | other | downstream | 1668349 | 7019151 ~ 7021424 (+) |
| G939408 | NA | other | downstream | 2223550 | 7574352 ~ 7574909 (+) |
| G939544 | NA | other | downstream | 2469718 | 7820520 ~ 7823317 (+) |
