G937439


Basic Information

Item Value
gene id G937439
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048575.1
NCBI id CM023229.2
chromosome length 86280908
location 5549586 ~ 5550268 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1069190
ATAATACAGCTCTAACTCAGTCTGACTGGTGCTGAAATCATCGTCAACCATCTTGGCTCTCCATCTCCCCCagtttctgtgtctctctgtgtctctatggtGACCACCAGGCTGCCCTATGGCAGGTCAGCACCTTTAATTTGTCTGTATGTGTCTCACTGGGTGTGGTTGGAGGAGGGCTGAGGGGATTGGCCCTAGGGAGTCTACTGCATCTCTACCTGTTACTGTTGGGTCTGGAGGTGCTGGCCCACTACCAACCCAGTCCCCTCGGGGGCGCCAGTCTGAGGCAGGCTCCCAGTGATAGTGTTGGAGGCCTGTATTGTGGGCTtcattgtctgtgtctgtggggagagggggaggtagccTTGGGCCTCTtcctcccagctccagtccctgGATGAGGCTTCCTCCCAGCTCCGTCCCCCTCTCCAGGTCATTGTGTCACACCTCCTTCTCCGTCAGCCCGTTGTTCCTGTTGCCACTGAAGACCAGCCCCGCCCCCTCGCTGTCTAGCCCCTCCTCCAGCTGATTGGCCACTCACGGGCAACCACCTCCCCCCCAGGCCCCTCCCCCTCTGATCTGCTGACGATGACGTCACAGAGATGATAACGTCATCGCAGACACCACCTGAGGACTGTCTAATGGCTTAGTCTCATCCGGGAGCTCATTCATAGATTGTAGTT

Function

NR:

description
PREDICTED: extracellular sulfatase Sulf-1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1069190 True 683 lncRNA 0.57 1 5549586 5550268

Neighbor

gene id symbol gene type direction distance location
LOC110535182 prdm14 coding upstream 110227 5432326 ~ 5439359 (+)
LOC110536532 LOC106579720 coding upstream 120140 5193181 ~ 5518848 (+)
LOC100136147 tram1 coding upstream 364779 5168887 ~ 5184807 (+)
LOC118937293 NA coding upstream 585922 4959044 ~ 4963664 (+)
eya1 LOC106590661 coding upstream 593401 4819745 ~ 4956185 (+)
LOC110535189 LOC106579706 coding downstream 478392 6028660 ~ 6038322 (+)
LOC110536599 LOC106579705 coding downstream 491574 6041842 ~ 6098398 (+)
LOC110535186 LOC106579708 coding downstream 577107 6127375 ~ 6139717 (+)
LOC110535188 LOC106579710 coding downstream 591447 6141715 ~ 6148083 (+)
LOC110535195 LOC106579699 coding downstream 702714 6252982 ~ 6498275 (+)
G937438 NA non-coding upstream 1987 5546407 ~ 5547599 (+)
G937236 NA non-coding upstream 43432 5504517 ~ 5506154 (+)
G937197 NA non-coding upstream 198784 5350463 ~ 5350802 (+)
G937190 NA non-coding upstream 241523 5307079 ~ 5308063 (+)
G937464 NA non-coding downstream 41832 5592100 ~ 5593586 (+)
G937469 NA non-coding downstream 51217 5601485 ~ 5616658 (+)
G937561 NA non-coding downstream 127663 5677931 ~ 5690813 (+)
G937601 NA non-coding downstream 211261 5761529 ~ 5762150 (+)
G937611 NA non-coding downstream 231754 5782022 ~ 5782416 (+)
G937237 NA other upstream 44257 5504704 ~ 5505329 (+)
G937096 xkr9 other upstream 405021 5143317 ~ 5144565 (+)
G937051 NA other upstream 521441 5019905 ~ 5028145 (+)
G935977 NA other upstream 1567388 3981851 ~ 3982198 (+)
G935976 NA other upstream 1568435 3980771 ~ 3981151 (+)
G937889 NA other downstream 571316 6121584 ~ 6122269 (+)
G938723 NA other downstream 1468883 7019151 ~ 7021424 (+)
G939408 NA other downstream 2024084 7574352 ~ 7574909 (+)
G939544 NA other downstream 2270252 7820520 ~ 7823317 (+)
G939690 NA other downstream 2589998 8140266 ~ 8140583 (+)

Expression


Co-expression Network