Gene
RNA
| Item | Value |
|---|---|
| gene id | G937558 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048575.1 |
| NCBI id | CM023229.2 |
| chromosome length | 86280908 |
| location | 5675711 ~ 5675919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: neurotrophin receptor-interacting factor 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1069314 | True | 209 | lncRNA | 0.41 | 1 | 5675711 | 5675919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536534 | sulf1 | coding | downstream | 48757 | 5546408 ~ 5626954 (-) |
| LOC118937461 | NA | coding | downstream | 161623 | 5511791 ~ 5514088 (-) |
| LOC110498599 | xkr9 | coding | downstream | 514590 | 5144231 ~ 5161121 (-) |
| LOC110536526 | kcnb2 | coding | downstream | 1298715 | 4361734 ~ 4376996 (-) |
| LOC110535180 | LOC106909841 | coding | downstream | 1588407 | 4078811 ~ 4087304 (-) |
| LOC110536541 | LOC106590236 | coding | upstream | 69575 | 5745494 ~ 5912106 (-) |
| LOC110535190 | lsm5 | coding | upstream | 362675 | 6038594 ~ 6041773 (-) |
| LOC110535187 | LOC106579707 | coding | upstream | 437581 | 6113500 ~ 6121564 (-) |
| LOC110536535 | LOC106579709 | coding | upstream | 472447 | 6148160 ~ 6261664 (-) |
| LOC110535193 | LOC106579700 | coding | upstream | 613508 | 6289427 ~ 6298369 (-) |
| G937557 | NA | non-coding | downstream | 1014 | 5674488 ~ 5674697 (-) |
| G937555 | NA | non-coding | downstream | 8462 | 5666822 ~ 5667249 (-) |
| G937522 | NA | non-coding | downstream | 82146 | 5592075 ~ 5593565 (-) |
| G937425 | NA | non-coding | downstream | 172316 | 5498896 ~ 5503395 (-) |
| G937749 | LOC100194703 | non-coding | upstream | 106649 | 5782568 ~ 5782832 (-) |
| G937753 | NA | non-coding | upstream | 114898 | 5790817 ~ 5791022 (-) |
| G937755 | NA | non-coding | upstream | 116678 | 5792597 ~ 5792835 (-) |
| G937764 | NA | non-coding | upstream | 144015 | 5819934 ~ 5820145 (-) |
| G937768 | NA | non-coding | upstream | 164555 | 5840474 ~ 5840990 (-) |
| G937256 | NA | other | downstream | 633012 | 5041827 ~ 5042699 (-) |
| G936486 | NA | other | downstream | 1606962 | 4065516 ~ 4068749 (-) |
| LOC110536524 | rdh10 | other | downstream | 1675462 | 3994738 ~ 4015695 (-) |
| G936199 | stau2 | other | downstream | 1894044 | 3687773 ~ 3781667 (-) |
| G936144 | NA | other | downstream | 2132392 | 3541428 ~ 3543319 (-) |
| G938130 | NA | other | upstream | 423471 | 6099390 ~ 6100232 (-) |
| G938277 | NA | other | upstream | 789994 | 6465913 ~ 6466685 (-) |
| G938331 | NA | other | upstream | 912524 | 6588443 ~ 6588817 (-) |
| G938351 | NA | other | upstream | 929266 | 6605185 ~ 6607755 (-) |
